Diffusion fftjetsvn rFFTJETSVN18

updated version
rFFTJETSVN18
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updated version

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igv	Authored on

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rFFTJETSVN17: big cleanup

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igv committed rFFTJETSVN18: updated version.Apr 5 2012, 9:58 PM

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trunk/

fftjet_manual.pdf

fftjet_manual.tex

variable_size_jets.eml

FindNClusters.cc

FindNClusters.hh

clusteringTreeVis.cc

discretizeMCEvent.cc

discretizeMCEvent.hh

estimateFFTNoise.cc

fftjet_typedefs.hh

PythiaJetGun.cc

PythiaJetGun.hh

SimpleGenerator.cc

SimpleGenerator.hh

pythia-6.4.20.f

iterateRecombinationAlg.hh

iterateRecombinationAlg.icc

geom3_Matrix3x3.icc

geom3_Point3.icc

geom3_Rotation3.icc

geom3_UnitVector3.icc

geom3_Vector3.icc

matchOneToOne.hh

multiScaleExample.cc

AbsClusterIntegrator.hh

ExtrapolatedClusterIntegrator.hh

ExtrapolatedClusterIntegrator.icc

leastSquaresPolyFit.cc

leastSquaresPolyFit.hh

processResults.cc

processResults.hh

singleScaleExample.cc

fuzzy_4d_response.dat

peak_response.dat

pythia_diffshapes_0.04.dat

AbsClusteringTree.hh

AbsClusteringTree.icc

AbsConvolverBase.hh

AbsDistanceCalculator.hh

AbsFFTEngine.hh

AbsFrequencyKernel.hh

AbsFrequencyKernel1d.hh

AbsJetCorrector.hh

AbsKernel1d.icc

AbsKernel2d.icc

AbsKernelConvolver.hh

AbsKernelConvolver.icc

AbsMembershipFunction.hh

AbsOpenDXTreeFormatter.hh

AbsOpenDXTreeFormatter.icc

AbsPatternRecognitionAlg.hh

AbsPeakSelector.hh

AbsPhiKernel.hh

AbsRecombinationAlg.hh

AbsRecombinationAlg.icc

AbsScalableKernel.hh

AbsScalableKernel1d.hh

AbsScalablePhiKernel.hh

AbsSequentialConvolver.hh

AbsSequentialConvolver.icc

AbsSymmetricKernel.cc

AbsSymmetricKernel.hh

AbsTreeFormatter.hh

AbsVectorRecombinationAlg.hh

CUFFTFloatEngine.cc

CUFFTFloatEngine.hh

ClusteringSequencer.hh

ClusteringSequencer.icc

ClusteringTreeSparsifier.hh

ClusteringTreeSparsifier.icc

CompositeKernel.cc

CompositeKernel.hh

ConstScaleReconstruction.hh

ConstScaleReconstruction.icc

DiscreteGauss1d.cc

DiscreteGauss1d.hh

DiscreteGauss2d.cc

DiscreteGauss2d.hh

EquidistantSequence.cc

EquidistantSequence.hh

EtCentroidRecombinationAlg.hh

EtCentroidVectorRecombinationAlg.hh

EtSumRecombinationAlg.hh

EtSumVectorRecombinationAlg.hh

EtaPhiEtInterpolator.hh

EtaPhiEtInterpolator.icc

FFTWDoubleEngine.hh

FFTWDoubleEngine.icc

FFTWFloatEngine.hh

FFTWFloatEngine.icc

FasterEtCentroidRecombinationAlg.hh

FasterEtSumRecombinationAlg.hh

FasterKernelRecombinationAlg.hh

FasterKernelRecombinationAlg.icc

FrequencyKernelConvolver.hh

FrequencyKernelConvolver.icc

FrequencySequentialConvolver.hh

FrequencySequentialConvolver.icc

GaussianNoiseMembershipFcn.hh

InterpolatedKernel.cc

InterpolatedKernel.hh

InterpolatedKernel3d.cc

InterpolatedKernel3d.hh

InterpolatedKernel3d.icc

InterpolatedMembershipFcn.hh

InterpolatedMembershipFcn.icc

JetMagnitudeMapper.hh

JetMagnitudeMapper.icc

JetMagnitudeMapper2d.hh

JetMagnitudeMapper2d.icc

Kernel1dFactory.cc

Kernel1dFactory.hh

Kernel2dFactory.cc

Kernel2dFactory.hh

KernelConvolver.hh

KernelConvolver.icc

KernelRecombinationAlg.hh

KernelRecombinationAlg.icc

KernelVectorRecombinationAlg.hh

KernelVectorRecombinationAlg.icc

LinearInterpolator1d.cc

LinearInterpolator1d.hh

LinearInterpolator1d.icc

LinearInterpolator2d.cc

LinearInterpolator2d.hh

LinearInterpolator2d.icc

LogProfileKernel.cc

LogProfileKernel.hh

MagneticSmearingKernel.hh

MagneticSmearingKernel.icc

MultiKernelConvolver.cc

MultiKernelConvolver.hh

MultiKernelConvolver.icc

OpenDXPeakTree.hh

PeakEtaDependentDistance.cc

PeakEtaDependentDistance.hh

PeakEtaPhiDistance.cc

PeakEtaPhiDistance.hh

PeakSelectors.hh

PeakSelectors.icc

ProfileKernel.cc

ProfileKernel.hh

ProximityClusteringTree.hh

ProximityClusteringTree.icc

PythiaKernel_30_100_v0.cc

PythiaKernel_30_100_v0.hh

RealFrequencyKernel.hh

RealFrequencyKernel1d.hh

RecombinationAlgFactory.hh

RecombinationAlgFactory.icc

RecombinedJet.hh

RecombinedJet.icc

ScaleSpaceKernel.hh

SequentialConvolver.hh

SequentialConvolver.icc

SimpleFunctors.hh

SimplePredicates.hh

SmallVector.icc

SparseClusteringTree.hh

SparseClusteringTree.icc

SpecialFunctions.cc

SpecialFunctions.hh

StatAccumulator.cc

StatAccumulator.hh

VectorRecombinationAlgFactory.hh

VectorRecombinationAlgFactory.icc

cdfCellNumber.cc

cdfCellNumber.hh

convertPeakCoords.hh

invertJetResponse.hh

invertJetResponse.icc

pythia_kernel_30_100_v0.scc

rectangleOverlap.cc

rectangleOverlap.hh

rectangleOverlap.scc

scanFrequencyKernel.hh

view_one_tree.net

view_tree_sequence.net

JetEtaPhiDistance.hh

JetEtaPhiDistance_clhep.hh

JetEtaPhiDistance_mini.hh

SegIntersect.cc

SegIntersect.hh

VBuilders_clhep.hh

VBuilders_mini.hh

detect_central_bump.dat

kernel_properties.dat

showKernelScan.tcl

showWeights.dat

test_Engine_128_128_0.5_0.7_Gauss2d.dat

detect_central_bump.cc

eval_kernel_set.scc

find_resolution.cc

kernel_properties.tcl

linear_interpolator_1d_show.cc

print_kernel_properties.cc

showWeights.tcl

test_ClusteringTree_cmh.cc

test_CudaEngine.cc

test_Engine_main.cc

test_FFTWEngine.cc

test_FloatEngine.cc

test_Instantiation.cc

test_JetMagnitudeMapper.cc

test_JetMagnitudeMapper2d_cmh.cc

test_Kernels.cc

test_Kernels_cmh.cc

test_PeakFinder.cc

test_SimpleFunctors.cc

test_SmallVector.cc

test_SpecialFunctions.cc

test_StatAccumulator.cc

test_invertJetResponse.cc

test_rectangleOverlap_cmh.cc

trigger_crash.cc

unittest_template.cc

weight_Kernel2d.cc

rFFTJETSVN18

trunk/AUTHORS

trunk/INSTALL

trunk/LICENSE

trunk/Makefile.am

trunk/Makefile.in

trunk/NEWS

trunk/README

trunk/aclocal.m4

trunk/autom4te.cache/

trunk/autom4te.cache/output.0

trunk/autom4te.cache/output.1

trunk/autom4te.cache/output.2

trunk/autom4te.cache/requests

trunk/autom4te.cache/traces.0

trunk/autom4te.cache/traces.1

trunk/autom4te.cache/traces.2

trunk/config.guess

trunk/config.sub

trunk/configure

trunk/configure.ac

trunk/depcomp

trunk/doc/

trunk/doc/Makefile

trunk/doc/fftjet_manual.pdf

trunk/doc/fftjet_manual.tex

trunk/doc/split.eps

trunk/doc/split.fig

trunk/doc/tree_image.eps

trunk/doc/trouble.ps

trunk/doc/variable_size_jets.eml

trunk/examples/

trunk/examples/FindNClusters.cc

trunk/examples/FindNClusters.hh

trunk/examples/Makefile.am

trunk/examples/Makefile.in

trunk/examples/README

trunk/examples/VBuilders.hh

trunk/examples/clusteringTreeVis.cc

trunk/examples/discretizeMCEvent.cc

trunk/examples/discretizeMCEvent.hh

trunk/examples/estimateFFTNoise.cc

trunk/examples/fftjet_typedefs.hh

trunk/examples/generator/

trunk/examples/generator/Makefile.am

trunk/examples/generator/Makefile.in

trunk/examples/generator/PythiaJetGun.cc

trunk/examples/generator/PythiaJetGun.hh

trunk/examples/generator/SimpleEvent.cc

trunk/examples/generator/SimpleEvent.hh

trunk/examples/generator/SimpleGenerator.cc

trunk/examples/generator/SimpleGenerator.hh

trunk/examples/generator/pythia-6.4.20.f

trunk/examples/generator/pythia6.c

trunk/examples/generator/pythia6.h

trunk/examples/iterateRecombinationAlg.hh

trunk/examples/iterateRecombinationAlg.icc

trunk/examples/kinematics/

trunk/examples/kinematics/Makefile.am

trunk/examples/kinematics/Makefile.in

trunk/examples/kinematics/geom3.cc

trunk/examples/kinematics/geom3.hh

trunk/examples/kinematics/geom3_Matrix3x3.icc

trunk/examples/kinematics/geom3_Point3.icc

trunk/examples/kinematics/geom3_Rotation3.icc

trunk/examples/kinematics/geom3_UnitVector3.icc

trunk/examples/kinematics/geom3_Vector3.icc

trunk/examples/kinematics/rk.cc

trunk/examples/kinematics/rk.hh

trunk/examples/kinematics/rk_Boost.icc

trunk/examples/kinematics/rk_P4.icc

trunk/examples/matchOneToOne.hh

trunk/examples/multiScaleExample.cc

trunk/examples/patreco/

trunk/examples/patreco/AbsClusterIntegrator.hh

trunk/examples/patreco/ExtrapolatedClusterIntegrator.hh

trunk/examples/patreco/ExtrapolatedClusterIntegrator.icc

trunk/examples/patreco/leastSquaresPolyFit.cc

trunk/examples/patreco/leastSquaresPolyFit.hh

trunk/examples/processResults.cc

trunk/examples/processResults.hh

trunk/examples/singleScaleExample.cc

trunk/examples/tables/

trunk/examples/tables/fuzzy_4d_response.dat

trunk/examples/tables/peak_response.dat

trunk/examples/tables/pythia_diffshapes_0.04.dat

trunk/fftjet/

trunk/fftjet.pc.in

trunk/fftjet/AbsClusteringTree.hh

trunk/fftjet/AbsClusteringTree.icc

trunk/fftjet/AbsConvolverBase.hh

trunk/fftjet/AbsDistanceCalculator.hh

trunk/fftjet/AbsFFTEngine.hh

trunk/fftjet/AbsFrequencyKernel.hh

trunk/fftjet/AbsFrequencyKernel1d.hh

trunk/fftjet/AbsJetCorrector.hh

trunk/fftjet/AbsKernel1d.cc

trunk/fftjet/AbsKernel1d.hh

trunk/fftjet/AbsKernel1d.icc

trunk/fftjet/AbsKernel2d.cc

trunk/fftjet/AbsKernel2d.hh

trunk/fftjet/AbsKernel2d.icc

trunk/fftjet/AbsKernelConvolver.hh

trunk/fftjet/AbsKernelConvolver.icc

trunk/fftjet/AbsMembershipFunction.hh

trunk/fftjet/AbsOpenDXTreeFormatter.hh

trunk/fftjet/AbsOpenDXTreeFormatter.icc

trunk/fftjet/AbsPatternRecognitionAlg.hh

trunk/fftjet/AbsPeakSelector.hh

trunk/fftjet/AbsPhiKernel.hh

trunk/fftjet/AbsRecombinationAlg.hh

trunk/fftjet/AbsRecombinationAlg.icc

trunk/fftjet/AbsScalableKernel.hh

trunk/fftjet/AbsScalableKernel1d.hh

trunk/fftjet/AbsScalablePhiKernel.hh

trunk/fftjet/AbsSequentialConvolver.hh

trunk/fftjet/AbsSequentialConvolver.icc

trunk/fftjet/AbsSymmetricKernel.cc

trunk/fftjet/AbsSymmetricKernel.hh

trunk/fftjet/AbsTreeFormatter.hh

trunk/fftjet/AbsVectorRecombinationAlg.hh

trunk/fftjet/CUFFTFloatEngine.cc

trunk/fftjet/CUFFTFloatEngine.hh

trunk/fftjet/ClusteringSequencer.hh

trunk/fftjet/ClusteringSequencer.icc

trunk/fftjet/ClusteringTreeSparsifier.hh

trunk/fftjet/ClusteringTreeSparsifier.icc

trunk/fftjet/CompositeKernel.cc

trunk/fftjet/CompositeKernel.hh

trunk/fftjet/ConstScaleReconstruction.hh

trunk/fftjet/ConstScaleReconstruction.icc

trunk/fftjet/DXGlyphInfo.cc

trunk/fftjet/DXGlyphInfo.hh

trunk/fftjet/DiscreteGauss1d.cc

trunk/fftjet/DiscreteGauss1d.hh

trunk/fftjet/DiscreteGauss2d.cc

trunk/fftjet/DiscreteGauss2d.hh

trunk/fftjet/EquidistantSequence.cc

trunk/fftjet/EquidistantSequence.hh

trunk/fftjet/EtCentroidRecombinationAlg.hh

trunk/fftjet/EtCentroidVectorRecombinationAlg.hh

trunk/fftjet/EtSumRecombinationAlg.hh

trunk/fftjet/EtSumVectorRecombinationAlg.hh

trunk/fftjet/EtaPhiEtInterpolator.hh

trunk/fftjet/EtaPhiEtInterpolator.icc

trunk/fftjet/FFTWDoubleEngine.hh

trunk/fftjet/FFTWDoubleEngine.icc

trunk/fftjet/FFTWEngine.hh

trunk/fftjet/FFTWEngine.icc

trunk/fftjet/FFTWFloatEngine.hh

trunk/fftjet/FFTWFloatEngine.icc

trunk/fftjet/FasterEtCentroidRecombinationAlg.hh

trunk/fftjet/FasterEtSumRecombinationAlg.hh

trunk/fftjet/FasterKernelRecombinationAlg.hh

trunk/fftjet/FasterKernelRecombinationAlg.icc

trunk/fftjet/FrequencyKernelConvolver.hh

trunk/fftjet/FrequencyKernelConvolver.icc

trunk/fftjet/FrequencySequentialConvolver.hh

trunk/fftjet/FrequencySequentialConvolver.icc

trunk/fftjet/GaussianNoiseMembershipFcn.hh

trunk/fftjet/Grid2d.hh

trunk/fftjet/Grid2d.icc

trunk/fftjet/InterpolatedKernel.cc

trunk/fftjet/InterpolatedKernel.hh

trunk/fftjet/InterpolatedKernel3d.cc

trunk/fftjet/InterpolatedKernel3d.hh

trunk/fftjet/InterpolatedKernel3d.icc

trunk/fftjet/InterpolatedMembershipFcn.hh

trunk/fftjet/InterpolatedMembershipFcn.icc

trunk/fftjet/JetMagnitudeMapper.hh

trunk/fftjet/JetMagnitudeMapper.icc

trunk/fftjet/JetMagnitudeMapper2d.hh

trunk/fftjet/JetMagnitudeMapper2d.icc

trunk/fftjet/JetProperty.hh

trunk/fftjet/Kernel1dFactory.cc

trunk/fftjet/Kernel1dFactory.hh

trunk/fftjet/Kernel2dFactory.cc

trunk/fftjet/Kernel2dFactory.hh

trunk/fftjet/KernelConvolver.hh

trunk/fftjet/KernelConvolver.icc

trunk/fftjet/KernelData.hh

trunk/fftjet/KernelData.icc

trunk/fftjet/KernelRecombinationAlg.hh

trunk/fftjet/KernelRecombinationAlg.icc

trunk/fftjet/KernelVectorRecombinationAlg.hh

trunk/fftjet/KernelVectorRecombinationAlg.icc

trunk/fftjet/Kernels.cc

trunk/fftjet/Kernels.hh

trunk/fftjet/Kernels1d.cc

trunk/fftjet/Kernels1d.hh

trunk/fftjet/LinearInterpolator1d.cc

trunk/fftjet/LinearInterpolator1d.hh

trunk/fftjet/LinearInterpolator1d.icc

trunk/fftjet/LinearInterpolator2d.cc

trunk/fftjet/LinearInterpolator2d.hh

trunk/fftjet/LinearInterpolator2d.icc

trunk/fftjet/LogProfileKernel.cc

trunk/fftjet/LogProfileKernel.hh

trunk/fftjet/MagneticSmearingKernel.hh

trunk/fftjet/MagneticSmearingKernel.icc

trunk/fftjet/Makefile.am

trunk/fftjet/Makefile.in

trunk/fftjet/Matrix.hh

trunk/fftjet/Matrix.icc

trunk/fftjet/MultiKernelConvolver.cc

trunk/fftjet/MultiKernelConvolver.hh

trunk/fftjet/MultiKernelConvolver.icc

trunk/fftjet/OpenDXPeakTree.hh

trunk/fftjet/Peak.cc

trunk/fftjet/Peak.hh

trunk/fftjet/PeakEtaDependentDistance.cc

trunk/fftjet/PeakEtaDependentDistance.hh

trunk/fftjet/PeakEtaPhiDistance.cc

trunk/fftjet/PeakEtaPhiDistance.hh

trunk/fftjet/PeakFinder.cc

trunk/fftjet/PeakFinder.hh

trunk/fftjet/PeakFinder.icc

trunk/fftjet/PeakSelectors.hh

trunk/fftjet/PeakSelectors.icc

trunk/fftjet/PhiKernels.cc

trunk/fftjet/PhiKernels.hh

trunk/fftjet/ProfileKernel.cc

trunk/fftjet/ProfileKernel.hh

trunk/fftjet/ProximityClusteringTree.hh

trunk/fftjet/ProximityClusteringTree.icc

trunk/fftjet/PythiaKernel_30_100_v0.cc

trunk/fftjet/PythiaKernel_30_100_v0.hh

trunk/fftjet/RealFrequencyKernel.hh

trunk/fftjet/RealFrequencyKernel1d.hh

trunk/fftjet/RecombinationAlgFactory.hh

trunk/fftjet/RecombinationAlgFactory.icc

trunk/fftjet/RecombinedJet.hh

trunk/fftjet/RecombinedJet.icc

trunk/fftjet/ScaleSpaceKernel.hh

trunk/fftjet/SequentialConvolver.hh

trunk/fftjet/SequentialConvolver.icc

trunk/fftjet/SimpleFunctors.hh

trunk/fftjet/SimplePredicates.hh

trunk/fftjet/SmallVector.hh

trunk/fftjet/SmallVector.icc

trunk/fftjet/SparseClusteringTree.hh

trunk/fftjet/SparseClusteringTree.icc

trunk/fftjet/SpecialFunctions.cc

trunk/fftjet/SpecialFunctions.hh

trunk/fftjet/StatAccumulator.cc

trunk/fftjet/StatAccumulator.hh

trunk/fftjet/VectorRecombinationAlgFactory.hh

trunk/fftjet/VectorRecombinationAlgFactory.icc

trunk/fftjet/binaryIO.hh

trunk/fftjet/cdfCellNumber.cc

trunk/fftjet/cdfCellNumber.hh

trunk/fftjet/convertPeakCoords.hh

trunk/fftjet/interpolate.hh

trunk/fftjet/invertJetResponse.hh

trunk/fftjet/invertJetResponse.icc

trunk/fftjet/pythia_kernel_30_100_v0.scc

trunk/fftjet/quartic_lib.cc

trunk/fftjet/quartic_lib.hh

trunk/fftjet/rectangleOverlap.cc

trunk/fftjet/rectangleOverlap.hh

trunk/fftjet/rectangleOverlap.scc

trunk/fftjet/scanFrequencyKernel.hh

trunk/install-sh

trunk/ltmain.sh

trunk/missing

trunk/opendx/

trunk/opendx/README

trunk/opendx/clustree.dx

trunk/opendx/view_one_tree.net

trunk/opendx/view_tree_sequence.net

trunk/rebuild

trunk/tests/

trunk/tests/JetEtaPhiDistance.hh

trunk/tests/JetEtaPhiDistance_clhep.hh

trunk/tests/JetEtaPhiDistance_mini.hh

trunk/tests/Makefile

trunk/tests/README

trunk/tests/SegIntersect.cc

trunk/tests/SegIntersect.hh

trunk/tests/VBuilders.hh

trunk/tests/VBuilders_clhep.hh

trunk/tests/VBuilders_mini.hh

trunk/tests/aip.c

trunk/tests/aip.hh

trunk/tests/data/

trunk/tests/data/detect_central_bump.dat

trunk/tests/data/kernel_properties.dat

trunk/tests/data/showKernelScan.tcl

trunk/tests/data/showWeights.dat

trunk/tests/data/test_Engine_128_128_0.5_0.7_Gauss2d.dat

trunk/tests/detect_central_bump.cc

trunk/tests/eval_kernel_set.scc

trunk/tests/find_resolution.cc

trunk/tests/kernel_properties.tcl

trunk/tests/linear_interpolator_1d_show.cc

trunk/tests/minimal4.hh

trunk/tests/numcompare

trunk/tests/print_kernel_properties.cc

trunk/tests/showWeights.tcl

trunk/tests/test_ClusteringTree_cmh.cc

trunk/tests/test_CudaEngine.cc

trunk/tests/test_Engine_main.cc

trunk/tests/test_FFTWEngine.cc

trunk/tests/test_FloatEngine.cc

trunk/tests/test_Grid2d.cc

trunk/tests/test_Instantiation.cc

trunk/tests/test_JetMagnitudeMapper.cc

trunk/tests/test_JetMagnitudeMapper2d_cmh.cc

trunk/tests/test_Kernels.cc

trunk/tests/test_Kernels_cmh.cc

trunk/tests/test_Matrix.cc

trunk/tests/test_PeakFinder.cc

trunk/tests/test_SimpleFunctors.cc

trunk/tests/test_SmallVector.cc

trunk/tests/test_SpecialFunctions.cc

trunk/tests/test_StatAccumulator.cc

trunk/tests/test_invertJetResponse.cc

trunk/tests/test_main.cc

trunk/tests/test_rectangleOverlap_cmh.cc

trunk/tests/test_utils.cc

trunk/tests/test_utils.hh

trunk/tests/trigger_crash.cc

trunk/tests/unittest_template.cc

trunk/tests/weight_Kernel2d.cc