diff --git a/MINERvA_NOvA_WS/FlatAnalysis.cc b/MINERvA_NOvA_WS/FlatAnalysis.cc
deleted file mode 100644
index e428144..0000000
--- a/MINERvA_NOvA_WS/FlatAnalysis.cc
+++ /dev/null
@@ -1,518 +0,0 @@
-int MyPalette[255];
-
-// Make the TPalette
-void SetCustomPalette() {
-  // Uncomment these to use the blue->white->red palette (good for correlation matrices)
-  TColor::InitializeColors();
-  const Int_t NRGBs = 5;
-  const Int_t NCont = 255;
-
-  Double_t stops[NRGBs] = { 0.00, 0.25, 0.50, 0.75, 1.00 };
-  Double_t red[NRGBs]   = { 0.00, 0.25, 1.00, 1.00, 0.50 };
-  Double_t green[NRGBs] = { 0.00, 0.25, 1.00, 0.25, 0.00 };
-  Double_t blue[NRGBs]  = { 0.50, 1.00, 1.00, 0.25, 0.00 };
-
-  int start = TColor::CreateGradientColorTable(NRGBs, stops, red, green, blue, NCont);
-  gStyle->SetNumberContours(NCont); 
-  for (int i = 0; i < NCont; i++) {
-    MyPalette[i] = start+i;
-  }
-}
-void FlatAnalysis(std::string filename, std::string novaname) {
-
-  gStyle->SetOptStat(0);
-  SetCustomPalette();
-
-  TFile *file = new TFile(filename.c_str(), "OPEN");
-  TTree *tree = (TTree*)file->Get("FlatTree_VARS");
-
-  TFile *filenova = new TFile(novaname.c_str(), "OPEN");
-  TTree *treenova = (TTree*)filenova->Get("FlatTree_VARS");
-
-  // Mode, cc, PDGnu, tgtA, PDGLep
-  // ELep, CosLep, Q2, q0, q3, Enu_true, Enu_QE, Q2_QE, W_nuc_rest, W, x, y
-  // nfsp, px[nfsp], py[nfsp], pz[nfsp], E[nfsp], pdg[nfsp]
-  // Weight (useless), InputWeight (useless), RWWeight (useless)
-  // fScaleFactor, CustomWeight, CustomWeightArray[6]
-  //
-  // flagCCINC, flagNCINC
-  // flagCCQE, flagCC0pi, flagCCQELike, flagNCEL, flagNC0pi
-  // flagCCcoh, flagNCcoh,
-  // flagCC1pip, flagNC1pip
-  // flagCC1pim, flagNC1pim
-  // flagCC1pi0, flagNC1pi0
-  //
-  double scalefactor = tree->GetMinimum("fScaleFactor");
-  double scalefactornova = treenova->GetMinimum("fScaleFactor");
-  if (scalefactor < 1E-42) {
-    scalefactor *= 1E42;
-    scalefactornova *= 1E42;
-  }
-  std::cout << scalefactor << std::endl;
-  std::cout << scalefactornova << std::endl;
-  
-  //const int WeightNumbers = 7;
-  const int WeightNumbers = 1;
-  std::string WeightType[WeightNumbers];
-  // The total weights
-  //WeightType[0] = "1";
-  WeightType[0] = "Weight";
-  //WeightType[1] = "CustomWeight";
-  //WeightType[2] = "CustomWeightArray[0]";
-  //WeightType[3] = "CustomWeightArray[1]";
-  //WeightType[4] = "CustomWeightArray[2]";
-  //WeightType[5] = "CustomWeightArray[3]";
-  //WeightType[6] = "CustomWeightArray[4]";
-  //WeightType[7] = "CustomWeightArray[5]";
-
-  std::string Names[WeightNumbers];
-  //Names[0] = "No Weight";
-  Names[0] = "Total Weight";
-  //Names[2] = "M_{A}^{QE} Weight";
-  //Names[3] = "Non-res Weight";
-  //Names[4] = "RPA QE Weight";
-  //Names[5] = "RPA RES Weight";
-  //Names[6] = "MEC Weight";
-  //Names[7] = "Total Weight";
-
-  // What we want to draw
-  std::vector<std::string> Draws2D;
-  //Draws2D.push_back("ELep:CosLep");
-  Draws2D.push_back("Q2:W");
-  Draws2D.push_back("q0:q3");
-  Draws2D.push_back("Q2:Enu_true");
-  Draws2D.push_back("Eav:Enu_true");
-
-  const int nModes = 8;
-  std::string Modes[nModes];
-  Modes[0]="Mode<30";
-  Modes[1]="Mode==1";
-  Modes[2]="Mode==2";
-  Modes[3]="Mode==11";
-  Modes[4]="Mode==12";
-  Modes[5]="Mode==13";
-  Modes[6]="Mode==21";
-  Modes[7]="Mode==26";
-
-  std::string ModeNames[nModes];
-  ModeNames[0]="CC-Inclusive";
-  ModeNames[1]="CCQE";
-  ModeNames[2]="2p2h";
-  ModeNames[3]="CC1#pi^{+}1p";
-  ModeNames[4]="CC1#pi^{0}";
-  ModeNames[5]="CC1#pi^{+}1n";
-  ModeNames[5]="CC Multi-#pi";
-  ModeNames[6]="CC DIS";
-
-  std::string LimX2D[Draws2D.size()];
-  //LimX2D[0]="0.0, 1.0";
-  LimX2D[0]="1.0, 2.0";
-  LimX2D[1]="0.0, 1.5";
-  LimX2D[2]="1.0, 3.0";
-  LimX2D[3]="1.0, 3.0";
-
-  std::string LimY2D[Draws2D.size()];
-  //LimY2D[0]="0.0, 3.0";
-  LimY2D[0]="0.0, 2.0";
-  LimY2D[1]="0.0, 1.5";
-  LimY2D[2]="0.0, 2.0";
-  LimY2D[3]="0.0, 0.5";
-
-  std::vector<std::string> Draws1D;
-  //Draws1D.push_back("ELep");
-  //Draws1D.push_back("CosLep");
-  Draws1D.push_back("Q2");
-  Draws1D.push_back("W");
-  Draws1D.push_back("x");
-  Draws1D.push_back("y");
-  Draws1D.push_back("Eav");
-
-  std::string LimX1D[Draws1D.size()];
-  LimX1D[0] = "0.0, 2.0";
-  LimX1D[1] = "1.0, 3.0";
-  LimX1D[2] = "0.0, 1.0";
-  LimX1D[3] = "0.0, 1.0";
-  LimX1D[4] = "0.0, 0.5";
-
-  TCanvas *canv = new TCanvas("canv", "canv", 1024, 1024);
-  canv->SetLeftMargin(canv->GetLeftMargin()*1.1);
-  canv->SetBottomMargin(canv->GetBottomMargin()*0.8);
-  canv->SetRightMargin(canv->GetRightMargin()*1.5);
-  canv->SetTopMargin(canv->GetTopMargin()*0.8);
-  std::string outname = filename;
-  outname = outname.substr(0, outname.find(".root"));
-  outname += "_output";
-  canv->Print((outname+".pdf[").c_str());
-
-  // The number of bins
-  int nBins = 70;
-
-  TFile *output = new TFile((outname+".root").c_str(), "RECREATE");
-
-  // Draw the 2D
-  for (int  i = 0; i < Draws2D.size(); ++i) {
-
-    // Split the 2D into two parts
-    std::string ypart = Draws2D[i].substr(0, Draws2D[i].find(":"));
-    std::string xpart = Draws2D[i].substr(Draws2D[i].find(":")+1, Draws2D[i].length());
-
-    for (int k = 0; k < nModes; ++k) {
-      std::string ModeString = Modes[k];
-      while (ModeString.find("(") != std::string::npos) {
-        ModeString.replace(ModeString.find("("), 1, "_");
-      }
-      while (ModeString.find(")") != std::string::npos) {
-        ModeString.replace(ModeString.find(")"), 1, "_");
-      }
-      while (ModeString.find("=") != std::string::npos) {
-        ModeString.replace(ModeString.find("="), 1, "_");
-      }
-
-      std::stringstream refname;
-      refname << ypart << ":" << xpart << ">>" << ypart << "_" << xpart << "_" << "noscale" << "_" << ModeString << "(" << nBins << ", ";
-      std::stringstream ss2;
-      ss2 << ", " << nBins << ", ";
-      std::string DrawCmd = refname.str() + LimX2D[i] + ss2.str() + LimY2D[i] + std::string(")");
-      std::string WeightDraw = Modes[k];
-      file->cd();
-      //std::cout << DrawCmd << std::endl;
-      //std::cout << WeightDraw << std::endl;
-      tree->Draw(DrawCmd.c_str(), WeightDraw.c_str(), "colz");
-      std::string refname_str = ypart+"_"+xpart+"_noscale_"+ModeString;
-
-      TH2D *refplot = (TH2D*)gDirectory->Get(refname_str.c_str())->Clone();
-      //std::cout << refname_str << std::endl;
-      refplot->Scale(scalefactor, "width");
-      refplot->GetXaxis()->SetTitle(xpart.c_str());
-      refplot->GetYaxis()->SetTitle(ypart.c_str());
-
-      gStyle->SetPalette(51);
-      // Make the string to draw
-      std::stringstream ssnovaref;
-      ssnovaref << ypart << ":" << xpart << ">>" << ypart << "_" << xpart << "_noscale_" << "CustomWeight" << "_" << ModeString << "_nova(" << nBins << ", ";
-
-      filenova->cd();
-      std::string DrawCmdnova = ssnovaref.str() + LimX2D[i] + ss2.str() + LimY2D[i] + std::string(")");
-      std::string WeightDrawnova = Modes[k];
-      //std::cout << DrawCmdnova << std::endl;
-      //std::cout << WeightDrawnova << std::endl;
-      treenova->Draw(DrawCmdnova.c_str(), WeightDrawnova.c_str(), "colz");
-      std::string refname_strnova = ypart+"_"+xpart+"_noscale_CustomWeight_"+ModeString+"_nova";
-      //std::cout << refname_strnova << std::endl;
-      TH2D *refplotnova = (TH2D*)gDirectory->Get(refname_strnova.c_str())->Clone();
-      refplotnova->Scale(scalefactornova, "width");
-      refplotnova->GetXaxis()->SetTitle(xpart.c_str());
-      refplotnova->GetYaxis()->SetTitle(ypart.c_str());
-
-      // Loop over the different weights
-      for (int j = 0; j < WeightNumbers; ++j) {
-
-        std::string WeightString = WeightType[j];
-        while (WeightString.find("[")!=std::string::npos) {
-          WeightString.replace(WeightString.find("["), 1, "_");
-        }
-        while (WeightString.find("]")!=std::string::npos) {
-          WeightString.replace(WeightString.find("]"), 1, "_");
-        }
-
-        // Make the string to draw
-        std::stringstream ss;
-        ss << ypart << ":" << xpart << ">>" << ypart << "_" << xpart << "_" << WeightString << "_" << ModeString << "(" << nBins << ", ";
-        gStyle->SetPalette(51);
-
-        DrawCmd = ss.str() + LimX2D[i] + ss2.str() + LimY2D[i] + std::string(")");
-        WeightDraw = WeightType[j] + "*(" + Modes[k] + ")";
-        canv->Clear();
-        file->cd();
-        tree->Draw(DrawCmd.c_str(), WeightDraw.c_str(), "colz");
-
-        std::string getname = ypart+"_"+xpart+"_"+WeightString+"_"+ModeString;
-        TH2D *plot = (TH2D*)gDirectory->Get(getname.c_str())->Clone();
-        plot->Scale(scalefactor, "width");
-
-        // Make the string to draw
-        std::stringstream ssnova;
-        ssnova << ypart << ":" << xpart << ">>" << ypart << "_" << xpart << "_" << "CustomWeight" << "_" << ModeString << "_nova(" << nBins << ", ";
-
-        DrawCmdnova = ssnova.str() + LimX2D[i] + ss2.str() + LimY2D[i] + std::string(")");
-        WeightDrawnova = std::string("CustomWeight") + "*(" + Modes[k] + ")";
-        treenova->Draw(DrawCmdnova.c_str(), WeightDrawnova.c_str(), "colz");
-        std::string getnamenova = ypart+"_"+xpart+"_"+"CustomWeight"+"_"+ModeString+"_nova";
-        TH2D *plotnova = (TH2D*)gDirectory->Get(getnamenova.c_str())->Clone();
-
-        plotnova->Scale(scalefactornova, "width");
-
-        if (plot->Integral() == refplot->Integral()) {
-          delete plot;
-          continue;
-        }
-
-        double maximum = plot->GetMaximum();
-        if (maximum < refplot->GetMaximum()) maximum = refplot->GetMaximum();
-        plot->GetZaxis()->SetRangeUser(-1*maximum/1000.0, maximum);
-        refplot->GetZaxis()->SetRangeUser(-1*maximum/1000.0, maximum);
-
-        plotnova->GetZaxis()->SetRangeUser(-1*maximum/1000.0, maximum);
-        refplotnova->GetZaxis()->SetRangeUser(-1*maximum/1000.0, maximum);
-
-        plot->GetXaxis()->SetTitle(xpart.c_str());
-        plot->GetYaxis()->SetTitle(ypart.c_str());
-        canv->Clear();
-        plot->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        canv->Clear();
-        refplot->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        plotnova->GetXaxis()->SetTitle(xpart.c_str());
-        plotnova->GetYaxis()->SetTitle(ypart.c_str());
-        canv->Clear();
-        plotnova->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        canv->Clear();
-        refplotnova->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        gStyle->SetPalette(255, MyPalette);
-        canv->Update();
-        // Make a difference plot
-        TH2D *diffplot = (TH2D*)plot->Clone();
-        plot->Divide(refplot);
-        //if (j == 0) maximum = plot->GetMaximum();
-        plot->GetZaxis()->SetRangeUser(0, 2);
-
-        std::string bla = (Names[j]+std::string(" MINERvA ")+ModeNames[k]);
-        plot->SetTitle(bla.c_str());
-        canv->Clear();
-        plot->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        output->cd();
-        plot->Write();
-
-        TH2D *diffplotnova = (TH2D*)plotnova->Clone();
-        plotnova->Divide(refplotnova);
-        //if (j == 0) maximum = plot->GetMaximum();
-        plotnova->GetZaxis()->SetRangeUser(0, 2);
-
-        std::string bla = (Names[j]+std::string(" NOvA ")+ModeNames[k]);
-        plotnova->SetTitle(bla.c_str());
-        canv->Clear();
-        plotnova->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        output->cd();
-        plotnova->Write();
-
-        // Make the difference plot
-        for (int a = 0; a < plot->GetXaxis()->GetNbins(); ++a) {
-          for (int b = 0; b < plot->GetYaxis()->GetNbins(); ++b) {
-            if (diffplot->GetBinContent(a+1,b+1) != 0) {
-              diffplot->SetBinContent(a+1, b+1, (diffplot->GetBinContent(a+1,b+1)-diffplotnova->GetBinContent(a+1, b+1))/diffplot->GetBinContent(a+1,b+1));
-            } else {
-              diffplot->SetBinContent(a+1, b+1, 0);
-            }
-          }
-        }
-        diffplot->GetZaxis()->SetRangeUser(-1.0, 1.0);
-        diffplot->SetTitle((std::string("(MINERvA tuned-NOvA tuned)/MINERvA tuned ")+ModeNames[k]).c_str());
-        diffplot->SetName((std::string(diffplot->GetName())+"_diff").c_str());
-
-        canv->Clear();
-        diffplot->Draw("colz");
-        canv->Print((outname+".pdf").c_str());
-
-        delete plot;
-        delete plotnova;
-        delete diffplot;
-        delete diffplotnova;
-      }
-      delete refplot;
-      delete refplotnova;
-    }
-  }
-
-  nBins = 40;
-  /// /////////////
-  // Now do the 1D
-  for (int i = 0; i < Draws1D.size(); ++i) {
-
-    for (int k = 0; k < nModes; ++k) {
-      std::string ModeString = Modes[k];
-      while (ModeString.find("(") != std::string::npos) {
-        ModeString.replace(ModeString.find("("), 1, "_");
-      }
-      while (ModeString.find(")") != std::string::npos) {
-        ModeString.replace(ModeString.find(")"), 1, "_");
-      }
-      while (ModeString.find("=") != std::string::npos) {
-        ModeString.replace(ModeString.find("="), 1, "_");
-      }
-
-      // Make the string to draw
-      std::stringstream refname;
-      refname << Draws1D[i] << ">>" << Draws1D[i] << "_" << "noscale" << "_" << ModeString << "(" << nBins << ", ";
-      std::string DrawCmd = refname.str() + LimX1D[i] + std::string(")");
-
-      std::string WeightDraw = std::string("(") + Modes[k] + ")";
-      file->cd();
-      tree->Draw(DrawCmd.c_str(), WeightDraw.c_str(), "colz");
-      std::string refname_str = Draws1D[i]+"_noscale_"+ModeString;
-      TH1D *refplot = (TH1D*)gDirectory->Get(refname_str.c_str())->Clone();
-      refplot->Scale(scalefactor, "width");
-      refplot->GetXaxis()->SetTitle(Draws1D[i].c_str());
-
-      // Make the string to draw
-      std::stringstream ssnovaref;
-      ssnovaref << Draws1D[i] << ">>" << Draws1D[i] << "_noscale_" << "CustomWeight" << "_" << ModeString << "_nova(" << nBins << ", ";
-
-      filenova->cd();
-      std::string DrawCmdnova = ssnovaref.str() + LimX1D[i] + std::string(")");
-      std::string WeightDrawnova = std::string("(") + Modes[k] + ")";
-      treenova->Draw(DrawCmdnova.c_str(), WeightDrawnova.c_str(), "colz");
-      std::string refname_strnova = Draws1D[i]+"_noscale_CustomWeight_"+ModeString+"_nova";
-      //std::cout << refname_strnova << std::endl;
-      TH1D *refplotnova = (TH1D*)gDirectory->Get(refname_strnova.c_str())->Clone();
-      refplotnova->Scale(scalefactornova, "width");
-      refplotnova->GetXaxis()->SetTitle(Draws1D[i].c_str());
-
-      // Loop over the different weights
-      for (int j = 0; j < WeightNumbers; ++j) {
-
-        std::string WeightString = WeightType[j];
-        while (WeightString.find("[")!=std::string::npos) {
-          WeightString.replace(WeightString.find("["), 1, "_");
-        }
-        while (WeightString.find("]")!=std::string::npos) {
-          WeightString.replace(WeightString.find("]"), 1, "_");
-        }
-
-        // Make the string to draw
-        std::stringstream ss;
-        ss << Draws1D[i] << ">>" << Draws1D[i] << "_" << WeightString << "_" << ModeString << "(" << nBins << ", ";
-
-        DrawCmd = ss.str() + LimX1D[i] + std::string(")");
-
-        WeightDraw = WeightType[j] + "*(" + Modes[k] + ")";
-        canv->Clear();
-        file->cd();
-        tree->Draw(DrawCmd.c_str(), WeightDraw.c_str(), "colz");
-        std::string getname = Draws1D[i]+"_"+WeightString+"_"+ModeString;
-        TH1D *plot = (TH1D*)gDirectory->Get(getname.c_str())->Clone();
-        plot->Scale(scalefactor, "width");
-
-        // Make the string to draw
-        std::stringstream ssnova;
-        ssnova << Draws1D[i] << ">>" << Draws1D[i] << "_" << "CustomWeight" << "_" << ModeString << "_nova(" << nBins << ", ";
-        DrawCmdnova = ssnova.str() + LimX1D[i] + std::string(")");
-        WeightDrawnova = std::string("CustomWeight") + "*(" + Modes[k] + ")";
-        canv->Clear();
-        treenova->Draw(DrawCmdnova.c_str(), WeightDrawnova.c_str(), "colz");
-        std::string getnamenova = Draws1D[i]+"_CustomWeight"+"_"+ModeString+"_nova";
-        TH2D *plotnova = (TH2D*)gDirectory->Get(getnamenova.c_str())->Clone();
-        plotnova->Scale(scalefactornova, "width");
-
-        if (plot->Integral() == refplot->Integral()) {
-          delete plot;
-          continue;
-        }
-
-        double maximum = plot->GetMaximum();
-        if (maximum < refplot->GetMaximum()) maximum = refplot->GetMaximum();
-        maximum *= 1.5;
-        plot->GetYaxis()->SetRangeUser(maximum, maximum);
-        refplot->GetYaxis()->SetRangeUser(0, maximum);
-
-        plotnova->GetYaxis()->SetRangeUser(0, maximum);
-        refplotnova->GetYaxis()->SetRangeUser(0, maximum);
-
-        plot->GetXaxis()->SetTitle(Draws1D[i].c_str());
-        canv->Clear();
-        refplot->SetLineColor(kRed);
-        refplot->SetLineWidth(2);
-        refplot->SetLineStyle(kDashed);
-        refplot->Draw();
-
-        plot->SetLineColor(kRed);
-        plot->SetLineWidth(2);
-        plot->Draw("same");
-
-        plotnova->GetXaxis()->SetTitle(Draws1D[i].c_str());
-        refplotnova->SetLineColor(kBlue);
-        refplotnova->SetLineStyle(kDashed);
-        refplotnova->SetLineWidth(2);
-        refplotnova->Draw("same");
-
-        plotnova->SetLineColor(kBlue);
-        plotnova->SetLineWidth(2);
-        plotnova->Draw("same");
-
-        TLegend *leg = new TLegend(0.5, 0.5, 0.95, 0.95);
-        leg->AddEntry(plot, "MINERvA tuned", "l");
-        leg->AddEntry(refplot, "MINERvA untuned", "l");
-        leg->AddEntry(plotnova, "NOvA tuned","l");
-        leg->AddEntry(refplotnova, "NOvA untuned", "l");
-        leg->SetBorderSize(0);
-        leg->SetFillStyle(0);
-        leg->SetFillColor(0);
-        leg->Draw("same");
-
-        canv->Print((outname+".pdf").c_str());
-        delete leg;
-
-        plot->Divide(refplot);
-        plot->GetYaxis()->SetRangeUser(0, 2);
-        TLine *line = new TLine(plot->GetXaxis()->GetBinLowEdge(1), 1, plot->GetXaxis()->GetBinLowEdge(plot->GetXaxis()->GetNbins()+1), 1);
-        line->SetLineStyle(kDashed);
-        line->SetLineWidth(2);
-        line->SetLineColor(kBlack);
-
-        std::string bla = (Names[j]+std::string(" Comp ")+ModeNames[k]);
-        plot->SetTitle(bla.c_str());
-        plot->SetLineColor(kRed);
-        plot->SetLineWidth(2);
-        canv->Clear();
-        plot->Draw();
-
-        plotnova->Divide(refplotnova);
-        plotnova->GetYaxis()->SetRangeUser(0, 2);
-        TLine *line = new TLine(plot->GetXaxis()->GetBinLowEdge(1), 1, plot->GetXaxis()->GetBinLowEdge(plot->GetXaxis()->GetNbins()+1), 1);
-        line->SetLineStyle(kDashed);
-        line->SetLineWidth(2);
-        line->SetLineColor(kBlack);
-
-        std::string bla = (Names[j]+std::string(" NOvA ")+ModeNames[k]);
-        plotnova->SetTitle(bla.c_str());
-        plotnova->SetLineColor(kBlue);
-        plotnova->SetLineWidth(2);
-        plotnova->Draw("same");
-        line->Draw("same");
-
-        TLegend *leg = new TLegend(0.5, 0.5, 0.95, 0.95);
-        leg->AddEntry(plot, "MINERvA tuned/untuned", "l");
-        leg->AddEntry(plotnova, "NOvA tuned/untuned","l");
-        leg->SetBorderSize(0);
-        leg->SetFillStyle(0);
-        leg->SetFillColor(0);
-        leg->Draw("same");
-
-        canv->Print((outname+".pdf").c_str());
-
-        output->cd();
-        plot->Write();
-        plotnova->Write();
-
-        delete plot;
-        delete plotnova;
-        delete line;
-      }
-      delete refplot;
-      delete refplotnova;
-    }
-  }
-
-  canv->Print((outname+".pdf]").c_str());
-  output->Close();
-}
diff --git a/MINERvA_NOvA_WS/exp_list.xml b/MINERvA_NOvA_WS/exp_list.xml
deleted file mode 100644
index 9f71121..0000000
--- a/MINERvA_NOvA_WS/exp_list.xml
+++ /dev/null
@@ -1,149 +0,0 @@
-<nuisance>
-
-  <!-- MINERvA CC0pi STV -->
-
-  <!-- MINERvA CCinc -->
-  <sample name="MINERvA_CCinc_XSec_2DEavq3_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-
-  <!-- MINERvA CC1pi+ -->
-  <sample name="MINERvA_CC1pip_XSec_1DTpi_nu_2017" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pip_XSec_1Dth_nu_2017" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pip_XSec_1Dpmu_nu_2017" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pip_XSec_1Dthmu_nu_2017" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <!-- We don't want the Q2 Enu
-  MINERvA_CC1pip_XSec_1DQ2_nu_2017
-  MINERvA_CC1pip_XSec_1DEnu_nu_2017
-  -->
-
-  <!-- MINERvA CC1pi0 nu -->
-  <sample name="MINERvA_CC1pi0_XSec_1DTpi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1Dth_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1Dpmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1Dthmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DWexp_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DPPi0Mass_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DPPi0MassDelta_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DCosAdler_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DPhiAdler_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <!-- 
-  MINERvA_CC1pi0_XSec_1DQ2_nu
-  MINERvA_CC1pi0_XSec_1DEnu_nu
-  -->
-
-  <!-- MINERvA CC1pi0 nubar -->
-  <sample name="MINERvA_CC1pi0_XSec_1Dthmu_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1Dpmu_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1DTpi0_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CC1pi0_XSec_1Dth_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <!-- The ppi0 is the 2015 measurement -->
-  <!-- MINERvA_CC1pi0_XSec_1Dppi0_antinu -->
-
-  <!-- MINERvA CCNpi+ -->
-  <sample name="MINERvA_CCNpip_XSec_1Dth_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CCNpip_XSec_1DTpi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CCNpip_XSec_1Dthmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <sample name="MINERvA_CCNpip_XSec_1Dpmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MINERvA_CH_Dipole_Nieves2p2h_NoMEC_Fix_merge_Prepared.root" />
-  <!-- Don't want Q2 Enu
-  MINERvA_CCNpip_XSec_1DQ2_nu
-  MINERvA_CCNpip_XSec_1DEnu_nu
-  -->
-
-  <!-- ################# MiniBooNE MEASUREMENTS ############# -->
-  <!-- MiniBooNE CCQE nu -->
-  <sample name="MiniBooNE_CCQE_XSec_1DQ2_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CCQE_XSec_2DTcos_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE CCQE anti-nu -->
-  <sample name="MiniBooNE_CCQE_XSec_1DQ2_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CCQE_XSec_2DTcos_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE CCQE-like nu -->
-  <sample name="MiniBooNE_CCQELike_XSec_1DQ2_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CCQELike_XSec_2DTcos_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE CCQE-like anti-nu -->
-  <sample name="MiniBooNE_CCQELike_XSec_1DQ2_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CCQELike_XSec_2DTcos_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE CC1pi+ -->
-  <sample name="MiniBooNE_CC1pip_XSec_1DTpi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pip_XSec_1DTu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pip_XSec_2DTpiCospi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pip_XSec_2DTuCosmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- Enu Q2 not useful
-  MiniBooNE_CC1pip_XSec_1DEnu_nu
-  MiniBooNE_CC1pip_XSec_1DQ2_nu
-  MiniBooNE_CC1pip_XSec_2DQ2Enu_nu
-  MiniBooNE_CC1pip_XSec_2DTpiEnu_nu
-  MiniBooNE_CC1pip_XSec_2DTuEnu_nu
-  -->
-
-  <!-- MiniBooNE CC1pi0 -->
-  <sample name="MiniBooNE_CC1pi0_XSec_1DTu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pi0_XSec_1Dcosmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pi0_XSec_1Dppi0_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_CC1pi0_XSec_1Dcospi0_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <!-- Enu Q2 not useful
-  MiniBooNE_CC1pi0_XSec_1DEnu_nu
-  MiniBooNE_CC1pi0_XSec_1DQ2_nu
-  -->
-
-  <!-- MiniBooNE NC1pi0 nu -->
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dcospi0_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dppi0_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE NC1pi0 anti-nu -->
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dcospi0_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dppi0_antinu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE NC1pi0 fhc -->
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dcospi0_fhc" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dppi0_fhc" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- MiniBooNE NC1pi0 rhc -->
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dcospi0_rhc" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="MiniBooNE_NC1pi0_XSec_1Dppi0_rhc" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/MiniBooNE_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-
-  <!-- ################# T2K MEASUREMENTS ############# -->
-  <!-- T2K STV -->
-  <sample name="T2K_CC0pinp_STV_XSec_1Ddpt_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pinp_STV_XSec_1Ddphit_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pinp_STV_XSec_1Ddat_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pinp_ifk_XSec_3Dinfp_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pinp_ifk_XSec_3Dinfa_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pinp_ifk_XSec_3Dinfip_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <sample name="T2K_CC0pi1p_XSec_3DPcoscos_nu_nonuniform" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- T2K CC0pi -->
-  <sample name="T2K_CC0pi_XSec_2DPcos_nu_nonuniform" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <!--
-  <sample name="T2K_CC0pi_XSec_2DPcos_nu_I" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC0pi_XSec_2DPcos_nu_II" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  -->
-  <sample name="T2K_CC0pi_XSec_2DPcos_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-
-
-  <!-- T2K CC1pi H2O -->
-  <sample name="T2K_CC1pip_H2O_XSec_1Dcosmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_H2O_XSec_1Dcosmupi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_H2O_XSec_1Dcospi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_H2O_XSec_1Dpmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_H2O_XSec_1Dppi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-
-  <!-- T2K CC1pip CH -->
-  <!--
-  <sample name="T2K_CC1pip_CH_XSec_1Dpmu_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1Dppi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1DQ2_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1Dq3_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1Dthmupi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1Dthpi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1Dthq3pi_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  <sample name="T2K_CC1pip_CH_XSec_1DWrec_nu" input="GENIE:/vols/t2k/users/cvw09/software/GENIE_output/MINERvA_NOvA_WS/Prepared/T2K_FluxAndTarget_WithMINERvAModel_3000000_merge_Prepared.root" />
-  -->
-
-</nuisance>
diff --git a/MINERvA_NOvA_WS/minerva_tune.xml b/MINERvA_NOvA_WS/minerva_tune.xml
deleted file mode 100644
index 6a32c67..0000000
--- a/MINERvA_NOvA_WS/minerva_tune.xml
+++ /dev/null
@@ -1,38 +0,0 @@
-<nuisance>
-
-  <!--
-      Rik Gran Res RPA
-  <parameter name="MINERvARW_RikRESRPA_ApplyRPA"  nominal="1.0" type="custom_parameter" />
-  -->
-
-  <!-- Apply these __only to 2p2h events__
-       10.5798 0.254032 0.50834 0.0571035 0.129051 0.875287
-       Make sure to modify the Gaussian correction to be a norma Gaussian, not a tilt-shift Gaussian
-  -->
-  <parameter name="GaussianCorr_2p2h_norm" nominal="10.5798"   type="custom_parameter" state="FIX"/>
-  <parameter name="GaussianCorr_2p2h_tilt" nominal="0.254032"  type="custom_parameter" state="FIX"/>
-  <parameter name="GaussianCorr_2p2h_Pq0"  nominal="0.50834"   type="custom_parameter" state="FIX"/>
-  <parameter name="GaussianCorr_2p2h_Wq0"  nominal="0.0571035" type="custom_parameter" state="FIX"/>
-  <parameter name="GaussianCorr_2p2h_Pq3"  nominal="0.129051"  type="custom_parameter" state="FIX"/>
-  <parameter name="GaussianCorr_2p2h_Wq3"  nominal="0.875287"  type="custom_parameter" state="FIX"/>
-
-  <!--
-       Rik Gran RPA
-  -->
-  <parameter name="MINERvARW_RikRPA_ApplyRPA"     nominal="1.0" type="custom_parameter" state="FIX"/>
-
-  <!--
-       Single pion non-resonant scaling
-  -->
-  <parameter name="NonRESBGvpCC1pi" nominal="-1.14" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvnCC1pi" nominal="-1.14" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvpNC1pi" nominal="-1.14" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvnNC1pi" nominal="-1.14" type="genie_parameter" state="FIX"/>
-
-  <!-- Scale by 0.50 with 0.50 uncertainity -->
-  <parameter name="NonRESBGvbarpCC1pi" nominal="-1.00" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvbarnCC1pi" nominal="-1.00" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvbarpNC1pi" nominal="-1.00" type="genie_parameter" state="FIX"/>
-  <parameter name="NonRESBGvbarnNC1pi" nominal="-1.00" type="genie_parameter" state="FIX"/>
-
-</nuisance>
diff --git a/MINERvA_NOvA_WS/plotscript.cc b/MINERvA_NOvA_WS/plotscript.cc
deleted file mode 100644
index acdeb05..0000000
--- a/MINERvA_NOvA_WS/plotscript.cc
+++ /dev/null
@@ -1,245 +0,0 @@
-void plotscript(std::string file1, std::string file2, std::string file3, std::string file4) {
-  // file1 untuned MINERvA
-  // file2 untuned NOvA
-  // file3 tuned MINERvA
-  // file4 tuned NOvA
-  TFile *f1 = new TFile(file1.c_str(), "OPEN");
-  TFile *f2 = new TFile(file2.c_str(), "OPEN");
-  TFile *f3 = new TFile(file3.c_str(), "OPEN");
-  TFile *f4 = new TFile(file4.c_str(), "OPEN");
-
-  // Loop through all
-  TIter next(f1->GetListOfKeys());
-  TKey *key;
-  std::string name;
-
-  TCanvas *canv = new TCanvas("canv", "canv", 1024, 1024);
-  canv->SetRightMargin(0.05);
-  canv->Print((file1+"_"+file2+"_comp.pdf[").c_str());
-
-  // Loop through all entries
-  while ((key = (TKey*)next())) {
-
-    // Get name of object
-    name = std::string(key->GetName());
-
-    if (name.find("_data") != std::string::npos && name.find("SHAPE") == std::string::npos && name.find("RATIO") == std::string::npos && name.find("sample") == std::string::npos) {
-      if (name == "MiniBooNE_CCQE_XSec_1DQ2_nu_data" || name == "MiniBooNE_CCQE_XSec_1DQ2_antinu_data" || name == "MiniBooNE_CCQELike_XSec_1DQ2_nu_CCQELIKE_BKG_data" || name == "MiniBooNE_CCQELike_XSec_1DQ2_antinu_data") continue;
-      if (name.find("_1D") != std::string::npos && name.find("MINERvA_CCinc_XSec") != std::string::npos) continue;
-
-      std::string bla = name.substr(0, name.find("_data"));
-      std::string dataName = name;
-
-      // Get class of object
-      TClass *cl = gROOT->GetClass(key->GetClassName());
-
-      // Check TH1D inheritance and that both files contain the name
-      if (!f2->GetListOfKeys()->Contains(name.c_str())) continue;
-      if (!f3->GetListOfKeys()->Contains(name.c_str())) continue;
-      if (!f4->GetListOfKeys()->Contains(name.c_str())) continue;
-
-      if (std::string((key->ReadObj())->ClassName()).compare("TH1D") == 0) {
-        std::cout << name << std::endl;
-
-        bool error = false;
-        TH1D *data = (TH1D*)(f1->Get(name.c_str()));
-        if (data == NULL) {
-          std::cerr << "no data" << std::endl;
-          error = true;
-        }
-
-        TH1D *MC = (TH1D*)(f1->Get((bla+"_MC").c_str()));
-        if (MC == NULL) {
-          std::cerr << "no MC" << std::endl;
-          error = true;
-        }
-        TH1D *MC2 = (TH1D*)(f2->Get((bla+"_MC").c_str()));
-        if (MC2 == NULL) {
-          std::cerr << "no MC2" << std::endl;
-          error = true;
-        }
-
-        TH1D *MC3 = (TH1D*)(f3->Get((bla+"_MC").c_str()));
-        if (MC3 == NULL) {
-          std::cerr << "no MC3" << std::endl;
-          error = true;
-        }
-
-        TH1D *MC4 = (TH1D*)(f4->Get((bla+"_MC").c_str()));
-        if (MC4 == NULL) {
-          std::cerr << "no MC4" << std::endl;
-          error = true;
-        }
-
-        if (error) continue;
-
-        data->SetMinimum(0);
-        for (int i = 0; i < MC->GetNbinsX() + 1; i++) {
-          MC->SetBinError(i+1, 0);
-          MC2->SetBinError(i+1, 0);
-        }
-
-        canv->cd();
-        data->Draw();
-        MC->Draw("same,hist");
-        MC2->Draw("same,hist");
-        MC3->Draw("same,hist");
-        MC4->Draw("same,hist");
-
-        double maximum = data->GetMaximum();
-        if (maximum < MC->GetMaximum()) maximum = MC->GetMaximum();
-        data->GetYaxis()->SetRangeUser(0, maximum*1.7);
-
-        data->SetLineWidth(2);
-        MC->SetLineWidth(2);
-        MC2->SetLineWidth(2);
-        MC3->SetLineWidth(2);
-        MC4->SetLineWidth(2);
-
-        MC->SetLineColor(kRed-9);
-        MC->SetMarkerStyle(0);
-        MC->SetLineStyle(kDashed);
-
-        MC2->SetLineColor(kRed+2);
-        MC2->SetMarkerStyle(0);
-        
-        MC3->SetLineColor(kBlue-9);
-        MC3->SetMarkerStyle(0);
-        MC3->SetLineStyle(kDashed);
-
-        MC4->SetLineColor(kBlue+2);
-        MC4->SetMarkerStyle(0);
-
-        TLegend *leg = new TLegend(0.6, 0.5, 0.95, 0.90);
-        leg->AddEntry(data, "Data", "le");
-        double chi2ndof = std::atof(MC->GetTitle())/MC->GetNbinsX();
-        double chi2ndof2 = std::atof(MC2->GetTitle())/MC->GetNbinsX();
-        double chi2ndof3 = std::atof(MC3->GetTitle())/MC->GetNbinsX();
-        double chi2ndof4 = std::atof(MC4->GetTitle())/MC->GetNbinsX();
-        leg->AddEntry(MC, Form("MINERvA untuned, #chi^{2}/ndof=%.2f", chi2ndof), "l");
-        leg->AddEntry(MC2, Form("MINERvA tuned, #chi^{2}/ndof=%.2f", chi2ndof2), "l");
-        leg->AddEntry(MC3, Form("NOvA untuned, #chi^{2}/ndof=%.2f", chi2ndof3), "l");
-        leg->AddEntry(MC4, Form("NOvA tuned, #chi^{2}/ndof=%.2f", chi2ndof4), "l");
-        leg->SetBorderSize(0);
-        leg->SetFillStyle(0);
-        leg->SetFillColor(0);
-        leg->Draw("same");
-
-        canv->Print((file1+"_"+file2+"_comp.pdf").c_str());
-        delete leg;
-
-        // Now draw the THStacks
-
-      } else if (std::string((key->ReadObj())->ClassName()).compare("TH2D") == 0) {
-        std::cout << name << std::endl;
-
-        // Do projections of the TH2D
-        bool error = false;
-        TH2D *data2d = (TH2D*)(f1->Get(name.c_str()));
-        if (data2d == NULL) {
-          std::cerr << "no data" << std::endl;
-          error = true;
-        }
-
-        TH2D *MC2d = (TH2D*)(f1->Get((bla+"_MC").c_str()));
-        if (MC2d == NULL) {
-          std::cerr << "no MC" << std::endl;
-          error = true;
-        }
-        TH2D *MC22d = (TH2D*)(f2->Get((bla+"_MC").c_str()));
-        if (MC22d == NULL) {
-          std::cerr << "no MC2" << std::endl;
-          error = true;
-        }
-
-        TH2D *MC32d = (TH2D*)(f3->Get((bla+"_MC").c_str()));
-        if (MC32d == NULL) {
-          std::cerr << "no MC3" << std::endl;
-          error = true;
-        }
-
-        TH2D *MC42d = (TH2D*)(f4->Get((bla+"_MC").c_str()));
-        if (MC42d == NULL) {
-          std::cerr << "no MC4" << std::endl;
-          error = true;
-        }
-
-        if (error) continue;
-
-        /*
-        data2d->SetMinimum(0);
-        for (int i = 0; i < MC2d->GetXaxis()->GetNbins()+1; i++) {
-          for (int j = 0; i < MC2d->GetYaxis()->GetNbins()+1; j++) {
-            MC2d->SetBinError(i+1, j+1, 0);
-            MC22d->SetBinError(i+1, j+1, 0);
-            MC32d->SetBinError(i+1, j+1, 0);
-            MC42d->SetBinError(i+1, j+1, 0);
-          }
-        }
-        */
-        // Do the projections
-        int nbinsx = data2d->GetXaxis()->GetNbins();
-        for (int i = 1; i < nbinsx+1; ++i) {
-          TH1D *datax = data2d->ProjectionY(Form("%s_%i,%i", data2d->GetName(), 0, i), i, i);
-          TH1D *mcx =   MC2d  ->ProjectionY(Form("%s_%i,%i", MC2d->GetName(),   1, i), i, i);
-          TH1D *mc2x =  MC22d ->ProjectionY(Form("%s_%i,%i", MC22d->GetName(),  2, i), i, i);
-          TH1D *mc3x =  MC32d ->ProjectionY(Form("%s_%i,%i", MC32d->GetName(),  3, i), i, i);
-          TH1D *mc4x =  MC42d ->ProjectionY(Form("%s_%i,%i", MC42d->GetName(),  4, i), i, i);
-
-          datax->Draw();
-          mcx->Draw("same,hist");
-          mc2x->Draw("same,hist");
-          mc3x->Draw("same,hist");
-          mc4x->Draw("same,hist");
-
-          double maximum = datax->GetMaximum();
-          if (maximum < MC->GetMaximum()) maximum = mcx->GetMaximum();
-          datax->GetYaxis()->SetRangeUser(0, maximum*1.7);
-          if (name == "MINERvA_CCinc_XSec_2DEavq3_nu_data") {
-            datax->GetXaxis()->SetRangeUser(0, 0.6);
-            datax->GetYaxis()->SetRangeUser(0, 6E-42);
-          }
-
-          mcx->SetLineColor(kRed-9);
-          mcx->SetMarkerStyle(0);
-          mcx->SetLineStyle(kDashed);
-
-          mc2x->SetLineColor(kRed+2);
-          mc2x->SetMarkerStyle(0);
-
-          mc3x->SetLineColor(kBlue-9);
-          mc3x->SetMarkerStyle(0);
-          mc3x->SetLineStyle(kDashed);
-
-          mc4x->SetLineColor(kBlue+2);
-          mc4x->SetMarkerStyle(0);
-
-          TLegend *leg = new TLegend(0.6, 0.5, 0.95, 0.90);
-          int nbins = MC->GetXaxis()->GetNbins()*MC->GetYaxis()->GetNbins();
-          double chi2ndof = std::atof(MC->GetTitle())/nbins;
-          double chi2ndof2 = std::atof(MC2->GetTitle())/nbins;
-          double chi2ndof3 = std::atof(MC3->GetTitle())/nbins;
-          double chi2ndof4 = std::atof(MC4->GetTitle())/nbins;
-          leg->AddEntry(datax, Form("Data %.2f-%.2f", data2d->GetXaxis()->GetBinLowEdge(i), data2d->GetXaxis()->GetBinLowEdge(i+1)), "le");
-          leg->AddEntry(MC, Form("MINERvA untuned, #chi^{2}/ndof=%.2f", chi2ndof), "l");
-          leg->AddEntry(MC2, Form("MINERvA tuned, #chi^{2}/ndof=%.2f", chi2ndof2), "l");
-          leg->AddEntry(MC3, Form("NOvA untuned, #chi^{2}/ndof=%.2f", chi2ndof3), "l");
-          leg->AddEntry(MC4, Form("NOvA tuned, #chi^{2}/ndof=%.2f", chi2ndof4), "l");
-          leg->SetBorderSize(0);
-          leg->SetFillStyle(0);
-          leg->SetFillColor(0);
-          leg->Draw("same");
-
-          canv->Print((file1+"_"+file2+"_comp.pdf").c_str());
-          delete leg;
-        }
-
-
-      }
-
-
-    }
-
-  }
-  canv->Print((file1+"_"+file2+"_comp.pdf]").c_str());
-}