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diff --git a/.gitignore b/.gitignore
index 1a79a52..ab3dbf2 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,4 +1,6 @@
*.pyc
FeynRules/*
*.log
-ehdecay.in
\ No newline at end of file
+ehdecay.in
+# vi temp files
+*.swp
diff --git a/Rosetta/config.txt b/Rosetta/config.txt
index 7698316..93b1b89 100644
--- a/Rosetta/config.txt
+++ b/Rosetta/config.txt
@@ -1,4 +1,4 @@
-eHDECAY_dir /Users/Ken/Work/Packages/Higgs/eHDECAY
+eHDECAY_dir /Users/ken/Work/Projects/Rosetta/dev/rosetta/eHDECAY
# eHDECAY_dir /PATH/TO/eHDECAY
-Lilith_dir /Users/Ken/Work/Packages/Higgs/Lilith/1.1.3
+Lilith_dir /Users/ken/Work/Projects/Rosetta/dev/rosetta/Lilith-1.1.3
# Lilith_dir /PATH/TO/Lilith
diff --git a/Rosetta/interfaces/Lilith/__init__.py b/Rosetta/interfaces/Lilith/__init__.py
index 51806c4..d8a4166 100644
--- a/Rosetta/interfaces/Lilith/__init__.py
+++ b/Rosetta/interfaces/Lilith/__init__.py
@@ -1,43 +1,46 @@
from distutils.version import StrictVersion
import sys
# from .. import config
from ...internal.settings import config
from errors import LilithImportError, LilithInterfaceError
################################################################################
# check for NumPy >= 1.6.1 and Scipy >= 0.9.0
try:
import numpy
- if StrictVersion(numpy.__version__) < StrictVersion('1.6.1'):
- raise ImportError
+ # if StrictVersion(numpy.__version__) < StrictVersion('1.6.1'):
+ # raise ImportError
except ImportError:
err = ('NumPy version 1.6.1 or more recent '
'must be installed to use Lilith interface')
raise LilithImportError(err)
+except Exception as err:
+ raise LilithImportError(err)
try:
import scipy
- if StrictVersion(scipy.__version__) < StrictVersion('0.9.0'):
- raise ImportError
+ # if StrictVersion(scipy.__version__) < StrictVersion('0.9.0'):
+ # raise ImportError
except ImportError:
err = ('SciPy version 0.9.0 or more recent '
'must be installed to use Lilith interface')
raise LilithImportError(err)
-
+except Exception as err:
+ raise LilithImportError(err)
# Lilith path
try:
import lilith
except ImportError:
try:
Lilith_dir = config['Lilith_dir']
sys.path.append(Lilith_dir)
import lilith
except KeyError:
err = ('Could not find option "Lilith_dir" in Rosetta/config.txt')
raise LilithImportError(err)
except ImportError:
err = ('check Lilith_dir option in '
'Rosetta/config.txt')
raise LilithImportError(err)
################################################################################
from interface import LilithInterface
diff --git a/dihiggs/TStest.py b/dihiggs/TStest.py
index b968ddb..ff8fe85 100755
--- a/dihiggs/TStest.py
+++ b/dihiggs/TStest.py
@@ -1,28 +1,43 @@
#!/usr/bin/env python
import numpy as np
import os
from python.functions import reweighter_from_histogram_and_file
from python.functions import AnalyticalReweighter
#os.system("python python/functions.py")
#scriptpath = "python/functions.py"
# Add the directory containing your module to the Python path (wants absolute paths)
#import sys
#sys.path.append(os.path.abspath("python/functions.py"))
#import AnalyticalReweighter
import argparse
parser = argparse.ArgumentParser(prog='TStest', description='Return the closest shape benchmark topology of a EFT point')
# arguments to chose the (B)SM point in training and application
parser.add_argument('--kl', type=float, default=1.0, help='Benchmark to calculate the limit')
parser.add_argument('--kt', type=float, default=1.0, help='Benchmark to calculate the limit')
parser.add_argument('--c2', type=float, default=0.0, help='Benchmark to calculate the limit')
parser.add_argument('--cg', type=float, default=0.0, help='Benchmark to calculate the limit')
parser.add_argument('--c2g', type=float, default=0.0, help='Benchmark to calculate the limit')
args = parser.parse_args()
ar = reweighter_from_histogram_and_file()
-BM = ar.TS_test(args.kl, args.kt, args.c2, args.cg, args.c2g)
+
+# First test example: find which benchmark point is the closest to the point passed as argument
+BM, TS = ar.TS_test(args.kl, args.kt, args.c2, args.cg, args.c2g)
+print("closest BM is # {} with TS {}".format(BM, TS))
+
+# Second test example: find point in the kl scan that is the closest to each BM point
+for ibm, bm in enumerate(ar.JHEP_BM):
+ bm_kl, bm_kt, bm_c2, bm_cg, bm_c2g = bm
+ kl_scan = []
+ for ikl in xrange(-200, 201, 1):
+ kl = ikl / 10.
+ kt = 1.
+ kl_scan.append((kl, kt, 0., 0., 0.))
+ BM, TS = ar.find_closest_points(bm_kl, bm_kt, bm_c2, bm_cg, bm_c2g, kl_scan)
+ coordinates = [kl_scan[x] for x in BM]
+ print("closest to BM # {} {} are points {} with TS {}".format(ibm, bm, coordinates, TS[0]))
diff --git a/dihiggs/python/functions.py b/dihiggs/python/functions.py
index 21f73d1..be88602 100644
--- a/dihiggs/python/functions.py
+++ b/dihiggs/python/functions.py
@@ -1,174 +1,201 @@
from __future__ import print_function
import numpy as np
#import array as array
from array import array
import math
-from scipy.special import factorial, gammaln
+from scipy.special import gammaln
#from root_numpy import hist2array
class AnalyticalReweighter(object):
- def __init__(self, bins, ref_effs, den_effs, bin_coefs, xs_coefs):
- self.bins = bins
- self.ref_effs = ref_effs
- self.den_effs = den_effs
- self.bin_coefs = bin_coefs
- self.xs_coefs = xs_coefs
-
- # load benchmarks
- self.klJHEP=[1.0, 7.5, 1.0, 1.0, -3.5, 1.0, 2.4, 5.0, 15.0, 1.0, 10.0, 2.4, 15.0]
- self.ktJHEP=[1.0, 1.0, 1.0, 1.0, 1.5, 1.0, 1.0, 1.0, 1.0, 1.0, 1.5, 1.0, 1.0]
- self.c2JHEP=[0.0, -1.0, 0.5, -1.5, -3.0, 0.0, 0.0, 0.0, 0.0, 1.0, -1.0, 0.0, 1.0]
- self.cgJHEP=[0.0, 0.0, -0.8, 0.0, 0.0, 0.8, 0.2, 0.2, -1.0, -0.6, 0.0, 1.0, 0.0]
- self.c2gJHEP=[0.0, 0.0, 0.6, -0.8, 0.0, -1.0, -0.2,-0.2, 1.0, 0.6, 0.0, -1.0, 0.0]
- print ("initialize")
-
- """
- Class to do event reweighting based on a fitted analytical formula.
+ def __init__(self, bins, ref_effs, den_effs, bin_coefs, xs_coefs):
+ self.bins = bins
+ self.ref_effs = ref_effs
+ self.den_effs = den_effs
+ self.bin_coefs = bin_coefs
+ self.xs_coefs = xs_coefs
+
+ # load benchmarks
+ self.klJHEP=[1.0, 7.5, 1.0, 1.0, -3.5, 1.0, 2.4, 5.0, 15.0, 1.0, 10.0, 2.4, 15.0]
+ self.ktJHEP=[1.0, 1.0, 1.0, 1.0, 1.5, 1.0, 1.0, 1.0, 1.0, 1.0, 1.5, 1.0, 1.0]
+ self.c2JHEP=[0.0, -1.0, 0.5, -1.5, -3.0, 0.0, 0.0, 0.0, 0.0, 1.0, -1.0, 0.0, 1.0]
+ self.cgJHEP=[0.0, 0.0, -0.8, 0.0, 0.0, 0.8, 0.2, 0.2, -1.0, -0.6, 0.0, 1.0, 0.0]
+ self.c2gJHEP=[0.0, 0.0, 0.6, -0.8, 0.0, -1.0, -0.2,-0.2, 1.0, 0.6, 0.0, -1.0, 0.0]
+ # same thing, different format for easier argument passing
+ self.JHEP_BM = []
+ for i in xrange(len(self.klJHEP)):
+ self.JHEP_BM.append((self.klJHEP[i], self.ktJHEP[i], self.c2JHEP[i], self.cgJHEP[i], self.c2gJHEP[i],))
+ print ("initialize")
+
+ """
+ Class to do event reweighting based on a fitted analytical formula.
Args:
bins (list): list of array-like with bin edges used
ref_effs (array-like): multi-dim array with reference efficiency
for each bin (e.g. SM).
den_effs (array-like): multi-dim array with denominator efficiency
for each bin (e.g. SM).
bin_coefs (array-like): multi-dim array with the analytical formula
coeficients per bin
xs_coefs (array-like): 1D array with the coeficients for the cross
sections
- """
-
- @staticmethod
- def analytical_formula(kl, kt, c2, cg, c2g, A):
- return A[0]*kt**4 + A[1]*c2**2 + (A[2]*kt**2 + A[3]*cg**2)*kl**2 \
+ """
+
+ @staticmethod
+ def analytical_formula(kl, kt, c2, cg, c2g, A):
+ return A[0]*kt**4 + A[1]*c2**2 + (A[2]*kt**2 + A[3]*cg**2)*kl**2 \
+ A[4]*c2g**2 + ( A[5]*c2 + A[6]*kt*kl )*kt**2 + (A[7]*kt*kl \
+ A[8]*cg*kl )*c2 + A[9]*c2*c2g + (A[10]*cg*kl \
+ A[11]*c2g)*kt**2+ (A[12]*kl*cg + A[13]*c2g )*kt*kl \
+ A[14]*cg*c2g*kl
- """
- Returns the R value according to the fitted analytical formula.
+ """
+ Returns the R value according to the fitted analytical formula.
Returns:
An array with the evaluation of the formula for those parameters,
might have to be transposed to recover the original shape.
"""
-
- def parameter_point(self, kl, kt, c2, cg, c2g):
- #precompute formula results for all bins and xs
- # transpose to have coefs in external index
- self.bin_results = self.analytical_formula(kl, kt, c2, cg, c2g,
+
+ def parameter_point(self, kl, kt, c2, cg, c2g):
+ #precompute formula results for all bins and xs
+ # transpose to have coefs in external index
+ self.bin_results = self.analytical_formula(kl, kt, c2, cg, c2g,
self.bin_coefs.T).T
- self.xs_results = self.analytical_formula(kl, kt, c2, cg, c2g,
+ self.xs_results = self.analytical_formula(kl, kt, c2, cg, c2g,
self.xs_coefs.T).T
- # compute numerator efficiency and total normalization
- self.num_effs = self.ref_effs*self.bin_results/self.xs_results
- self.Cnorm = self.num_effs.sum()
- # compute weight per bin (normalized by sum)
- self.bin_weights = (self.num_effs/self.den_effs)/self.Cnorm
- bin_weights_ret = (self.ref_effs*self.bin_results/self.xs_results)/self.Cnorm
- return bin_weights_ret
- """ Precompute all required information for a certain EFT point.
+ # compute numerator efficiency and total normalization
+ self.num_effs = self.ref_effs*self.bin_results/self.xs_results
+ self.Cnorm = self.num_effs.sum()
+ # compute weight per bin (normalized by sum)
+ self.bin_weights = (self.num_effs/self.den_effs)/self.Cnorm
+ bin_weights_ret = (self.ref_effs*self.bin_results/self.xs_results)/self.Cnorm
+ return bin_weights_ret
+ """ Precompute all required information for a certain EFT point.
Note:
It has to be called before find_bin and weight methods.
Args:
kl (float): EFT parameter
kt (float): EFT parameter
c2 (float): EFT parameter
cg (float): EFT parameter
c2g (float): EFT parameter
- """
-
- def TS_test(self, kl, kt, c2, cg, c2g):
- print ("Calculating TS")
- normEv = 1200000000
- TS = np.zeros(13)
- EvByBin = np.absolute(np.rint(normEv*self.parameter_point( kl, kt, c2, cg, c2g)))
- logPoint = np.float64(np.log(np.float64(gammaln(EvByBin))))
- # factorial gives overflow, so we use gammaln as approximation
- for bench in range(0,13) :
- EvByBinBM = np.absolute(normEv*self.parameter_point(self.klJHEP[bench], self.ktJHEP[bench], self.c2JHEP[bench],self.cgJHEP[bench], self.c2gJHEP[bench] ))
- #print (bench,self.Cnorm,EvByBin.sum(),EvByBinBM.sum())
- logBM = np.log(np.float64(gammaln(EvByBinBM))) # last bins are giving negative = increase fit precision
- NSumInt = np.rint((EvByBin+EvByBinBM)/2)
- logSum = np.float64(np.log(np.float64(gammaln(NSumInt))))
- test = np.float64(-2*(logPoint + logBM -2*logSum ))
- TS[bench] = test.sum()
- #print (np.absolute(TS))
- minTS = np.argmin(TS)
- print ("Closest benchmark is:",minTS)
- return int(minTS)
-
-
- def find_bin(self, variables):
- bin_ids = np.empty_like(variables, dtype=np.int64)
- for i_v, bins_arr in enumerate(self.bins):
- # substract 1 so bins start in 0
- bin_ids[:,i_v] = np.digitize(variables[:,i_v], bins=bins_arr) - 1
- return bin_ids
+ """
+
+
+ def compute_TS(self, kl_1, kt_1, c2_1, cg_1, c2g_1, kl_2, kt_2, c2_2, cg_2, c2g_2):
+ """
+ Compute the Test Statistics as defined in https://arxiv.org/pdf/1507.02245v4.pdf
+ for a pair of points in the 5D EFT parameter space
+ """
+ normEv = 1200000000
+ TS = np.zeros(1)
+ EvByBin_1 = normEv * self.parameter_point(kl_1, kt_1, c2_1, cg_1, c2g_1)
+ EvByBin_1 = np.absolute(np.rint(EvByBin_1)) # restrict weights to positive integers
+ log_n1 = gammaln(EvByBin_1) # same as log of factorial
+ EvByBin_2 = normEv * self.parameter_point(kl_2, kt_2, c2_2, cg_2, c2g_2)
+ EvByBin_2 = np.absolute(np.rint(EvByBin_2))
+ log_n2 = gammaln(EvByBin_2) # last bins are giving negative = increase fit precision
+ EvByBin_3 = (EvByBin_1 + EvByBin_2) / 2
+ log_n3 = gammaln(EvByBin_3)
+ test = np.float64(log_n1 + log_n2 - 2 * log_n3)
+ TS = -2 * test.sum()
+ return TS
+
+
+ def find_closest_points(self, kl, kt, c2, cg, c2g, tuple_list):
+ """
+ Loop over a list of points to find the closest match, with the TS as a metric
+ returns the list of indices within the list, and the list of distances
+ """
+ TS = np.zeros(len(tuple_list))
+ for point in xrange(len(tuple_list)):
+ TS[point] = self.compute_TS(kl, kt, c2, cg, c2g, *tuple_list[point])
+ closestBM = np.argmax(TS)
+ list_allmaxs = np.where(TS == TS.max())[0].tolist()
+ list_allTS = [TS[p] for p in list_allmaxs]
+ return list_allmaxs, list_allTS
+
+
+ def TS_test(self, kl, kt, c2, cg, c2g):
+ """
+ Loop over the list of benchmark points to find the closest match, with the TS as a metric
+ """
+ return self.find_closest_points(kl, kt, c2, cg, c2g, self.JHEP_BM)
+
+
+ def find_bin(self, variables):
+ bin_ids = np.empty_like(variables, dtype=np.int64)
+ for i_v, bins_arr in enumerate(self.bins):
+ # substract 1 so bins start in 0
+ bin_ids[:,i_v] = np.digitize(variables[:,i_v], bins=bins_arr) - 1
+ return bin_ids
""" Finds the bins corresponding to each event.
Args:
variable (np.array): 2-D float np.array of shape (n_events, n_rw_vars)
Returns:
A 2D int64 array of shape (n_events, n_rw_vars) with the indexes
for each event obtained using np.digitize for each variable.
"""
- def weight(self, variables):
- bin_ids = self.find_bin(variables)
- weights = self.bin_weights[[ bin_ids[:,i_v] for i_v in range(bin_ids.shape[1])]]
- """ Finds the weight corresponding to each event.
+
+ def weight(self, variables):
+ bin_ids = self.find_bin(variables)
+ weights = self.bin_weights[[ bin_ids[:,i_v] for i_v in range(bin_ids.shape[1])]]
+ """ Finds the weight corresponding to each event.
Args:
variable (np.array): 2-D float np.array of shape (n_events, n_rw_vars)
Returns:
A 1D float array of shape (n_events,) with the corresponding weight
per event.
- """
- return weights
+ """
+ return weights
+
def reweighter_from_histogram_and_file():
- bins = [([ 250., 260., 270., 280., 290., 300., 310.,
+ bins = [([ 250., 260., 270., 280., 290., 300., 310.,
320., 330., 340., 350., 360., 370., 380.,
390., 400., 410., 420., 430., 440., 450.,
460., 470., 480., 490., 500., 510., 520.,
530., 540., 550., 560., 570., 580., 590.,
600., 610., 620., 630., 640., 650., 660.,
670., 680., 690., 700., 750., 800., 850.,
900., 950., 1000., 1100., 1200., 1300., 1400.,
1500., 1750., 2000., 50000.]), ([ 0., 0.40000001, 0.60000002, 0.80000001, 1. ])]
- n_ev_V0_sum=np.loadtxt('data/n_ev_V0_sum_59_4.out')
- den_effs=n_ev_V0_sum/n_ev_V0_sum.sum()
-
- column_names = ["n_samples"]
- var_center_names = [ "mhh_center", "costhst_center"]
- column_names += var_center_names
- n_ev_names = ["n_ev_SM", "n_ev_JHEP_sum"]
- column_names += n_ev_names
- coef_names = ["A_{}".format(i) for i in range(0,15)]
- column_names += coef_names
- coef_err_names = ["A_err_{}".format(i) for i in range(0,15)]
- column_names += coef_err_names
-
- data_from_file = np.genfromtxt("data/coefficientsByBin_extended_3M_costHHSim_59-4.txt", names = column_names)
-
- # asumming consistent ordering in text file (could digitize otherwise)
- n_ev_SM = data_from_file[n_ev_names[0]].reshape(den_effs.shape)
- ref_effs = n_ev_SM/n_ev_SM.sum()
-
- bin_coefs = data_from_file[coef_names].view(np.float)\
+ n_ev_V0_sum=np.loadtxt('data/n_ev_V0_sum_59_4.out')
+ den_effs=n_ev_V0_sum/n_ev_V0_sum.sum()
+
+ column_names = ["n_samples"]
+ var_center_names = [ "mhh_center", "costhst_center"]
+ column_names += var_center_names
+ n_ev_names = ["n_ev_SM", "n_ev_JHEP_sum"]
+ column_names += n_ev_names
+ coef_names = ["A_{}".format(i) for i in range(0,15)]
+ column_names += coef_names
+ coef_err_names = ["A_err_{}".format(i) for i in range(0,15)]
+ column_names += coef_err_names
+
+ data_from_file = np.genfromtxt("data/coefficientsByBin_extended_3M_costHHSim_59-4.txt", names = column_names)
+
+ # asumming consistent ordering in text file (could digitize otherwise)
+ n_ev_SM = data_from_file[n_ev_names[0]].reshape(den_effs.shape)
+ ref_effs = n_ev_SM/n_ev_SM.sum()
+
+ bin_coefs = data_from_file[coef_names].view(np.float)\
.reshape(den_effs.shape+(len(coef_names),))
- # hardcoded coeficients for total cross section
- xs_coefs = np.array([2.09078, 10.1517, 0.282307, 0.101205, 1.33191,
+ # hardcoded coeficients for total cross section
+ xs_coefs = np.array([2.09078, 10.1517, 0.282307, 0.101205, 1.33191,
-8.51168, -1.37309, 2.82636, 1.45767, -4.91761,
-0.675197, 1.86189, 0.321422, -0.836276,
-0.568156])
- analytical_reweighter = AnalyticalReweighter(bins, ref_effs, den_effs, bin_coefs, xs_coefs)
+ analytical_reweighter = AnalyticalReweighter(bins, ref_effs, den_effs, bin_coefs, xs_coefs)
- return analytical_reweighter
+ return analytical_reweighter

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