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Index: trunk/autom4te.cache/requests
===================================================================
--- trunk/autom4te.cache/requests (revision 776)
+++ trunk/autom4te.cache/requests (revision 777)
@@ -1,283 +1,283 @@
# This file was generated by Autom4te Wed Jan 22 14:03:12 UTC 2020.
# It contains the lists of macros which have been traced.
# It can be safely removed.
@request = (
bless( [
'0',
1,
[
'/usr/share/autoconf'
],
[
'/usr/share/autoconf/autoconf/autoconf.m4f',
'-',
'/usr/share/aclocal-1.16/internal/ac-config-macro-dirs.m4',
'/usr/share/aclocal/pkg.m4',
'/usr/share/aclocal-1.16/amversion.m4',
'/usr/share/aclocal-1.16/auxdir.m4',
'/usr/share/aclocal-1.16/cond.m4',
'/usr/share/aclocal-1.16/depend.m4',
'/usr/share/aclocal-1.16/depout.m4',
'/usr/share/aclocal-1.16/extra-recurs.m4',
'/usr/share/aclocal-1.16/init.m4',
'/usr/share/aclocal-1.16/install-sh.m4',
'/usr/share/aclocal-1.16/lead-dot.m4',
'/usr/share/aclocal-1.16/make.m4',
'/usr/share/aclocal-1.16/missing.m4',
'/usr/share/aclocal-1.16/options.m4',
'/usr/share/aclocal-1.16/prog-cc-c-o.m4',
'/usr/share/aclocal-1.16/runlog.m4',
'/usr/share/aclocal-1.16/sanity.m4',
'/usr/share/aclocal-1.16/silent.m4',
'/usr/share/aclocal-1.16/strip.m4',
'/usr/share/aclocal-1.16/substnot.m4',
'/usr/share/aclocal-1.16/tar.m4',
'm4/libtool.m4',
'm4/ltoptions.m4',
'm4/ltsugar.m4',
'm4/ltversion.m4',
'm4/lt~obsolete.m4',
'configure.ac'
],
{
- 'LT_SYS_DLOPEN_SELF' => 1,
- 'AC_LIBTOOL_SYS_HARD_LINK_LOCKS' => 1,
- 'include' => 1,
+ '_LT_CC_BASENAME' => 1,
+ 'AC_LIBTOOL_FC' => 1,
+ 'LTOPTIONS_VERSION' => 1,
+ 'LT_AC_PROG_RC' => 1,
+ 'PKG_CHECK_VAR' => 1,
+ '_LT_AC_LANG_F77' => 1,
'LT_LANG' => 1,
- 'AM_MISSING_HAS_RUN' => 1,
- 'AM_PROG_INSTALL_STRIP' => 1,
- 'AC_PROG_LD' => 1,
- 'AM_MAKE_INCLUDE' => 1,
- 'AC_CHECK_LIBM' => 1,
- 'AM_SET_LEADING_DOT' => 1,
- 'LTOBSOLETE_VERSION' => 1,
- 'AC_LIBTOOL_SYS_GLOBAL_SYMBOL_PIPE' => 1,
+ 'AC_LTDL_OBJDIR' => 1,
+ '_AM_AUTOCONF_VERSION' => 1,
+ '_AM_SET_OPTIONS' => 1,
+ 'AM_CONDITIONAL' => 1,
+ 'AM_EXTRA_RECURSIVE_TARGETS' => 1,
+ 'AM_SUBST_NOTMAKE' => 1,
+ 'AM_SANITY_CHECK' => 1,
+ 'AM_PROG_CC_C_O' => 1,
+ 'm4_pattern_forbid' => 1,
+ 'AC_LIBTOOL_GCJ' => 1,
+ 'AC_LIBTOOL_LANG_CXX_CONFIG' => 1,
+ 'AC_LIBTOOL_PROG_CC_C_O' => 1,
+ '_LT_LINKER_BOILERPLATE' => 1,
+ '_PKG_SHORT_ERRORS_SUPPORTED' => 1,
+ 'LT_PATH_NM' => 1,
+ 'AM_SET_CURRENT_AUTOMAKE_VERSION' => 1,
+ '_LT_DLL_DEF_P' => 1,
+ 'PKG_PROG_PKG_CONFIG' => 1,
+ '_LT_AC_LANG_F77_CONFIG' => 1,
+ 'AC_LIBTOOL_LANG_F77_CONFIG' => 1,
+ 'AC_LIBTOOL_SYS_HARD_LINK_LOCKS' => 1,
+ '_LT_PROG_FC' => 1,
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+ 'LT_AC_PROG_GCJ' => 1,
+ 'AM_INIT_AUTOMAKE' => 1,
+ 'LT_PROG_RC' => 1,
+ 'AC_LIBTOOL_RC' => 1,
+ '_LT_PATH_TOOL_PREFIX' => 1,
+ '_LT_AC_CHECK_DLFCN' => 1,
+ '_LT_PROG_CXX' => 1,
'AC_LIBTOOL_PICMODE' => 1,
- '_AC_AM_CONFIG_HEADER_HOOK' => 1,
+ 'AC_ENABLE_STATIC' => 1,
+ '_LT_AC_TAGVAR' => 1,
+ 'AM_AUTOMAKE_VERSION' => 1,
+ 'AC_PROG_LIBTOOL' => 1,
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'AM_PROG_INSTALL_SH' => 1,
+ '_LT_AC_TAGCONFIG' => 1,
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+ 'PKG_INSTALLDIR' => 1,
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+ 'AM_PROG_LIBTOOL' => 1,
+ 'AC_LIBTOOL_PROG_COMPILER_NO_RTTI' => 1,
+ 'LTSUGAR_VERSION' => 1,
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+ 'include' => 1,
+ 'AC_DEFUN' => 1,
+ 'AM_SET_DEPDIR' => 1,
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+ 'AC_LIBTOOL_LANG_RC_CONFIG' => 1,
+ 'AC_LIBTOOL_CONFIG' => 1,
+ 'AC_PROG_NM' => 1,
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+ 'm4_pattern_allow' => 1,
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'_AM_MANGLE_OPTION' => 1,
+ 'AC_LIBTOOL_SYS_DYNAMIC_LINKER' => 1,
+ '_AC_PROG_LIBTOOL' => 1,
+ '_LT_REQUIRED_DARWIN_CHECKS' => 1,
+ 'PKG_CHECK_EXISTS' => 1,
+ 'AM_DISABLE_STATIC' => 1,
'AC_LIBTOOL_SYS_OLD_ARCHIVE' => 1,
- 'AC_DISABLE_FAST_INSTALL' => 1,
- 'AU_DEFUN' => 1,
- 'AM_ENABLE_STATIC' => 1,
- 'AC_DISABLE_STATIC' => 1,
- 'AM_CONDITIONAL' => 1,
- 'AC_LIBTOOL_RC' => 1,
- 'LT_AC_PROG_EGREP' => 1,
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+ 'AC_LIBTOOL_POSTDEP_PREDEP' => 1,
'_LT_AC_FILE_LTDLL_C' => 1,
- 'AC_PROG_LD_GNU' => 1,
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'AM_AUX_DIR_EXPAND' => 1,
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- 'LT_PROG_GCJ' => 1,
- 'AC_LIBTOOL_PROG_LD_HARDCODE_LIBPATH' => 1,
- 'AC_LTDL_OBJDIR' => 1,
- 'PKG_NOARCH_INSTALLDIR' => 1,
- '_AC_PROG_LIBTOOL' => 1,
- 'LT_SUPPORTED_TAG' => 1,
- 'AC_DEFUN_ONCE' => 1,
- 'AC_DEPLIBS_CHECK_METHOD' => 1,
- 'AC_DEFUN' => 1,
- 'AM_AUTOMAKE_VERSION' => 1,
- 'AC_PROG_EGREP' => 1,
- 'AC_LIBTOOL_DLOPEN_SELF' => 1,
- 'AM_DISABLE_SHARED' => 1,
+ '_AM_CONFIG_MACRO_DIRS' => 1,
'_LT_AC_TRY_DLOPEN_SELF' => 1,
- '_AM_OUTPUT_DEPENDENCY_COMMANDS' => 1,
- 'LT_PROG_GO' => 1,
- 'AM_ENABLE_SHARED' => 1,
- 'AC_LIBTOOL_F77' => 1,
- '_LT_AC_SHELL_INIT' => 1,
- '_AM_PROG_TAR' => 1,
+ 'AC_PATH_TOOL_PREFIX' => 1,
+ '_AC_AM_CONFIG_HEADER_HOOK' => 1,
+ 'AC_LIBTOOL_SYS_GLOBAL_SYMBOL_PIPE' => 1,
+ '_LT_AC_LANG_CXX_CONFIG' => 1,
+ 'AC_DISABLE_STATIC' => 1,
+ '_LT_AC_LOCK' => 1,
+ 'AC_LIBTOOL_DLOPEN' => 1,
'_AM_PROG_CC_C_O' => 1,
- '_LT_REQUIRED_DARWIN_CHECKS' => 1,
+ 'LTOBSOLETE_VERSION' => 1,
+ '_LT_AC_SYS_COMPILER' => 1,
+ 'm4_include' => 1,
+ 'LT_INIT' => 1,
'AC_LIBTOOL_LINKER_OPTION' => 1,
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- 'AM_SILENT_RULES' => 1,
- '_LT_AC_CHECK_DLFCN' => 1,
- 'LTSUGAR_VERSION' => 1,
+ 'AU_DEFUN' => 1,
+ 'AC_LTDL_PREOPEN' => 1,
+ 'AC_DEPLIBS_CHECK_METHOD' => 1,
'AC_LIBTOOL_WIN32_DLL' => 1,
- 'AC_LIBTOOL_GCJ' => 1,
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- 'AC_LIBTOOL_LANG_C_CONFIG' => 1,
- 'LTVERSION_VERSION' => 1,
- 'LT_OUTPUT' => 1,
- 'LT_AC_PROG_SED' => 1,
+ 'AM_MAKE_INCLUDE' => 1,
+ 'LT_AC_PROG_EGREP' => 1,
+ '_LT_PROG_LTMAIN' => 1,
'LT_PATH_LD' => 1,
- '_LT_AC_LANG_F77_CONFIG' => 1,
+ '_LT_AC_SHELL_INIT' => 1,
+ 'AM_DEP_TRACK' => 1,
+ '_LT_AC_LANG_C_CONFIG' => 1,
+ 'LT_SUPPORTED_TAG' => 1,
+ 'LT_PROG_GO' => 1,
+ '_LT_PROG_F77' => 1,
'_LT_AC_SYS_LIBPATH_AIX' => 1,
- 'm4_pattern_forbid' => 1,
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- 'AC_LTDL_PREOPEN' => 1,
- '_LT_COMPILER_OPTION' => 1,
- '_LT_PATH_TOOL_PREFIX' => 1,
- 'LT_AC_PROG_GCJ' => 1,
+ '_AM_DEPENDENCIES' => 1,
+ 'AC_PROG_EGREP' => 1,
'_LT_AC_PROG_CXXCPP' => 1,
- '_LT_LINKER_BOILERPLATE' => 1,
- 'PKG_INSTALLDIR' => 1,
- '_LT_PROG_F77' => 1,
- 'AM_PROG_LD' => 1,
- 'AM_DEP_TRACK' => 1,
+ 'AC_LIBTOOL_COMPILER_OPTION' => 1,
'_LT_AC_LANG_GCJ_CONFIG' => 1,
- '_AM_AUTOCONF_VERSION' => 1,
- 'AC_LIBTOOL_PROG_COMPILER_PIC' => 1,
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- 'AM_SANITY_CHECK' => 1,
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- 'AC_LIBTOOL_POSTDEP_PREDEP' => 1,
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- 'AC_CONFIG_MACRO_DIR' => 1,
- '_m4_warn' => 1,
- 'PKG_CHECK_VAR' => 1,
- 'AM_PROG_CC_C_O' => 1,
- 'AC_ENABLE_STATIC' => 1,
- 'AC_LIBTOOL_DLOPEN' => 1,
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- 'AM_DISABLE_STATIC' => 1,
- '_AM_CONFIG_MACRO_DIRS' => 1,
- '_LT_AC_LANG_CXX' => 1,
- '_LT_AC_TAGCONFIG' => 1,
- '_AM_DEPENDENCIES' => 1,
- 'AC_LIBTOOL_LANG_F77_CONFIG' => 1,
- 'AC_PATH_MAGIC' => 1,
'PKG_CHECK_MODULES' => 1,
- 'LT_AC_PROG_RC' => 1,
- 'AC_ENABLE_FAST_INSTALL' => 1,
+ '_AM_PROG_TAR' => 1,
'_LT_AC_PROG_ECHO_BACKSLASH' => 1,
- 'AC_LIBTOOL_OBJDIR' => 1,
- 'AM_EXTRA_RECURSIVE_TARGETS' => 1,
- 'AC_ENABLE_SHARED' => 1,
- '_LT_AC_LANG_F77' => 1,
- '_LT_AC_LANG_GCJ' => 1,
- 'AM_SET_DEPDIR' => 1,
- '_LT_PROG_CXX' => 1,
'AC_DISABLE_SHARED' => 1,
- '_LT_PREPARE_SED_QUOTE_VARS' => 1,
- 'AC_LIBTOOL_FC' => 1,
- 'AM_INIT_AUTOMAKE' => 1,
- 'LT_INIT' => 1,
- '_LT_AC_LANG_RC_CONFIG' => 1,
- 'AC_LIBTOOL_COMPILER_OPTION' => 1,
- '_LT_WITH_SYSROOT' => 1,
- 'LTOPTIONS_VERSION' => 1,
- 'AC_LIBTOOL_LANG_CXX_CONFIG' => 1,
- '_PKG_SHORT_ERRORS_SUPPORTED' => 1,
- 'AM_SET_CURRENT_AUTOMAKE_VERSION' => 1,
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- '_LT_PROG_FC' => 1,
- 'AC_LIBTOOL_LANG_GCJ_CONFIG' => 1,
- 'PKG_CHECK_EXISTS' => 1,
- 'AM_PROG_NM' => 1,
- '_LT_AC_TAGVAR' => 1,
+ 'AC_ENABLE_FAST_INSTALL' => 1,
'_LT_PROG_ECHO_BACKSLASH' => 1,
'AC_LIBTOOL_CXX' => 1,
+ 'AC_LIBTOOL_SETUP' => 1,
+ 'LTVERSION_VERSION' => 1,
+ 'AC_PROG_LD' => 1,
+ 'AC_LIBTOOL_F77' => 1,
+ 'AC_LIBTOOL_PROG_LD_SHLIBS' => 1,
+ 'AC_ENABLE_SHARED' => 1,
+ 'LT_SYS_DLOPEN_SELF' => 1,
'AC_LTDL_ENABLE_INSTALL' => 1,
- '_LT_AC_LANG_CXX_CONFIG' => 1,
- 'AC_LIBTOOL_PROG_CC_C_O' => 1,
- 'LT_PATH_NM' => 1,
- 'AC_CONFIG_MACRO_DIR_TRACE' => 1,
- 'PKG_PROG_PKG_CONFIG' => 1,
- 'AC_LIBTOOL_CONFIG' => 1
+ '_AM_SUBST_NOTMAKE' => 1,
+ '_LT_COMPILER_BOILERPLATE' => 1,
+ 'AM_MISSING_HAS_RUN' => 1,
+ 'AC_CONFIG_MACRO_DIR' => 1,
+ 'LT_OUTPUT' => 1,
+ '_LT_AC_LANG_GCJ' => 1,
+ 'AM_DISABLE_SHARED' => 1,
+ 'AC_LIBTOOL_LANG_C_CONFIG' => 1,
+ '_LT_LINKER_OPTION' => 1,
+ 'AM_PROG_LD' => 1,
+ 'PKG_NOARCH_INSTALLDIR' => 1,
+ 'AM_ENABLE_SHARED' => 1,
+ 'AC_LIBTOOL_OBJDIR' => 1,
+ 'AC_LIBTOOL_DLOPEN_SELF' => 1,
+ 'AM_RUN_LOG' => 1,
+ 'AC_LIBTOOL_PROG_LD_HARDCODE_LIBPATH' => 1,
+ '_LT_WITH_SYSROOT' => 1,
+ 'AC_LIBTOOL_SYS_MAX_CMD_LEN' => 1,
+ '_LT_AC_LANG_RC_CONFIG' => 1
}
], 'Autom4te::Request' ),
bless( [
'1',
1,
[
'/usr/share/autoconf'
],
[
'/usr/share/autoconf/autoconf/autoconf.m4f',
'aclocal.m4',
'configure.ac'
],
{
- 'AM_XGETTEXT_OPTION' => 1,
- '_LT_AC_TAGCONFIG' => 1,
- 'AC_CANONICAL_TARGET' => 1,
+ 'AC_FC_SRCEXT' => 1,
+ 'AM_PROG_CXX_C_O' => 1,
+ '_AM_COND_IF' => 1,
'LT_SUPPORTED_TAG' => 1,
- 'AC_FC_FREEFORM' => 1,
'AM_AUTOMAKE_VERSION' => 1,
- 'AM_GNU_GETTEXT_INTL_SUBDIR' => 1,
- 'LT_CONFIG_LTDL_DIR' => 1,
- 'AM_EXTRA_RECURSIVE_TARGETS' => 1,
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- 'AH_OUTPUT' => 1,
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- 'LT_INIT' => 1,
- 'AM_ENABLE_MULTILIB' => 1,
- 'AC_CONFIG_HEADERS' => 1,
- 'AM_PROG_AR' => 1,
+ 'AC_PROG_LIBTOOL' => 1,
+ 'AM_PATH_GUILE' => 1,
+ 'AC_INIT' => 1,
+ 'AC_REQUIRE_AUX_FILE' => 1,
'AC_CANONICAL_SYSTEM' => 1,
- 'AM_SILENT_RULES' => 1,
- 'AC_CONFIG_AUX_DIR' => 1,
- 'AC_CANONICAL_BUILD' => 1,
- 'AC_CONFIG_SUBDIRS' => 1,
+ '_m4_warn' => 1,
+ 'AC_DEFINE_TRACE_LITERAL' => 1,
+ '_AM_MAKEFILE_INCLUDE' => 1,
+ 'AM_PROG_LIBTOOL' => 1,
+ 'AM_PROG_MKDIR_P' => 1,
'sinclude' => 1,
- 'm4_include' => 1,
- 'AM_PROG_FC_C_O' => 1,
- 'AC_INIT' => 1,
- 'm4_pattern_allow' => 1,
- 'AC_FC_SRCEXT' => 1,
+ '_AM_COND_ENDIF' => 1,
+ 'AM_PROG_F77_C_O' => 1,
+ '_LT_AC_TAGCONFIG' => 1,
'AM_MAINTAINER_MODE' => 1,
'_AM_SUBST_NOTMAKE' => 1,
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- 'include' => 1,
- 'm4_pattern_forbid' => 1,
- 'AM_GNU_GETTEXT' => 1,
- '_AM_COND_ELSE' => 1,
+ 'AM_PROG_MOC' => 1,
'AC_LIBSOURCE' => 1,
- 'AC_FC_PP_SRCEXT' => 1,
- 'AC_CONFIG_LIBOBJ_DIR' => 1,
- 'AM_POT_TOOLS' => 1,
- 'AC_PROG_LIBTOOL' => 1,
- 'AC_REQUIRE_AUX_FILE' => 1,
+ 'AC_CONFIG_LINKS' => 1,
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'AC_SUBST_TRACE' => 1,
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+ 'm4_pattern_allow' => 1,
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+ 'AC_CONFIG_HEADERS' => 1,
+ 'AM_PROG_FC_C_O' => 1,
+ 'AC_CONFIG_LIBOBJ_DIR' => 1,
+ '_AM_COND_ELSE' => 1,
+ 'AM_GNU_GETTEXT' => 1,
+ 'LT_CONFIG_LTDL_DIR' => 1,
'AC_SUBST' => 1,
- 'AM_CONDITIONAL' => 1,
- 'AM_NLS' => 1,
- '_m4_warn' => 1,
- 'AC_FC_PP_DEFINE' => 1,
+ 'AM_GNU_GETTEXT_INTL_SUBDIR' => 1,
+ 'AM_POT_TOOLS' => 1,
+ 'm4_pattern_forbid' => 1,
+ 'AC_CANONICAL_HOST' => 1,
+ 'AM_ENABLE_MULTILIB' => 1,
+ 'AM_SILENT_RULES' => 1,
'AM_PROG_CC_C_O' => 1,
- 'AM_PROG_LIBTOOL' => 1,
- 'AM_PROG_F77_C_O' => 1,
- 'AM_PROG_MKDIR_P' => 1,
- 'AM_PATH_GUILE' => 1
+ 'AC_FC_PP_DEFINE' => 1,
+ 'AC_FC_FREEFORM' => 1,
+ 'AM_PROG_AR' => 1,
+ 'AC_CANONICAL_TARGET' => 1,
+ 'm4_sinclude' => 1,
+ 'AC_CANONICAL_BUILD' => 1,
+ 'AH_OUTPUT' => 1,
+ 'AM_NLS' => 1,
+ 'AC_CONFIG_AUX_DIR' => 1,
+ 'LT_INIT' => 1,
+ 'AM_XGETTEXT_OPTION' => 1,
+ 'AC_FC_PP_SRCEXT' => 1,
+ 'm4_include' => 1,
+ 'AM_INIT_AUTOMAKE' => 1
}
], 'Autom4te::Request' )
);
Index: trunk/npstat/wrap/PyFunctor1.hh
===================================================================
--- trunk/npstat/wrap/PyFunctor1.hh (revision 776)
+++ trunk/npstat/wrap/PyFunctor1.hh (revision 777)
@@ -1,62 +1,62 @@
#ifndef NPSTAT_PYFUNCTOR1_HH_
#define NPSTAT_PYFUNCTOR1_HH_
#include <cassert>
#include "npstat/wrap/pyWrapUtils.hh"
namespace npstat {
class PyFunctor1
{
public:
- inline PyFunctor1(PyObject* callable)
+ inline explicit PyFunctor1(PyObject* callable)
: pFunc_(0)
{
validatePyCallable(callable);
pFunc_ = callable;
Py_INCREF(pFunc_);
}
inline PyFunctor1(const PyFunctor1& r)
: pFunc_(r.pFunc_)
{
Py_INCREF(pFunc_);
}
inline PyFunctor1& operator=(const PyFunctor1& r)
{
if (this != &r)
{
Py_XDECREF(pFunc_);
pFunc_ = r.pFunc_;
Py_INCREF(pFunc_);
}
return *this;
}
inline ~PyFunctor1() {Py_XDECREF(pFunc_);}
inline double operator()(const double x_in) const
{
// Build the arguments for the callable
PyObject *pArgs = PyTuple_New(1);
DecrefHandle h_pArgs(pArgs);
PyObject* x = PyFloat_FromDouble(x_in);
assert(x);
PyTuple_SetItem(pArgs, 0, x);
// Evaluate the callable
PyObject* pValue = PyObject_CallObject(pFunc_, pArgs);
if (!pValue) throw std::runtime_error(
"In npstat::PyFunctor1::operator(): object call failed");
DecrefHandle h_pValue(pValue);
return getDoubleFromPyObj(pValue);
}
private:
PyObject* pFunc_;
};
}
#endif // NPSTAT_PYFUNCTOR1_HH_
Index: trunk/npstat/stat/00README.txt
===================================================================
--- trunk/npstat/stat/00README.txt (revision 776)
+++ trunk/npstat/stat/00README.txt (revision 777)
@@ -1,794 +1,803 @@
The code in this directory can depend on headers from the "nm" and "rng"
directories in the "npstat" package.
The classes implemented in this directory can be split into several
subgroups by their purpose:
* Data representation
* Descriptive statistics
* Statistical distributions
* Fitting of parametric models
* Statistical testing
* Local filtering
* Nonparametric density estimation
* Deconvolution density estimation (Unfolding)
* Nonparametric regression
* Interpolation of statistical distributions
* Miscellaneous data analysis techniques
* Convenience API
* Utilities
* I/O
Data representation
-------------------
AbsNtuple.hh -- interface class for ntuples. Implemented in InMemoryNtuple.hh,
ArchivedNtuple.hh. To be used by application code.
NtHistoFill.hh, NtNtupleFill.hh, NtRectangularCut.hh -- convenience classes
and functors for use inside "cycleOverRows", "conditionalCycleOverRows",
and other similar ntuple methods.
Column.hh -- helper class for AbsNtuple.hh. Can be used to refer to ntuple
columns either by name or by column number. Used by AbsNtuple.hh, and
should not be used separately.
ArchivedNtuple.hh -- class for storing huge ntuples which do not fit in the
computer memory. To be used by application code.
HistoAxis.hh -- representation of a histogram axis with equidistant bins.
NUHistoAxis.hh -- representation of a histogram axis with non-uniform bins.
DualHistoAxis.hh -- histogram axis which works reasonably well for both
uniform and non-uniform bins.
convertAxis.hh -- conversion functions between histogram and grid axes.
HistoND.hh -- arbitrary-dimensional histogram template.
interpolateHistoND.hh -- interpolation of histogram data to coordinate
values between bin centers.
mergeTwoHistos.hh -- a utility for smooth blending of two histograms.
ProductSymmetricBetaNDCdf.hh -- an interpolation function for blending
histograms.
InMemoryNtuple.hh -- class for storing small ntuples which completely fit
in the computer memory. Works faster than ArchivedNtuple.
NtupleBuffer.hh -- data buffer for data exchange between ArchivedNtuple and
disk-based archive.
OrderedPointND.hh -- a multidimensional point which can be sorted according
to multiple sorting criteria.
randomHistoFill1D.hh -- utilities for filling 1-d histograms with random
samples.
randomHistoFillND.hh -- utilities for filling multivariate histograms with
random samples.
StorableMultivariateFunctor.hh -- Base class for storable multivariate functors.
StorableHistoNDFunctor.hh -- Adaptation that represents HistoND as
a StorableMultivariateFunctor.
HistoNDFunctorInstances.hh -- A number of concrete typedefs for
StorableHistoNDFunctor template.
StorableInterpolationFunctor.hh -- Adaptation that represents
LinInterpolatedTableND as a StorableMultivariateFunctor.
InterpolationFunctorInstances.hh -- A number of concrete typedefs for
StorableInterpolationFunctor template.
Descriptive statistics
----------------------
ArrayProjectors.hh -- helper classes for making lower-dimensional projections
of the ArrayND class. Calculate various statistics over projected
dimensions (mean, median, etc).
arrayStats.hh -- means, standard deviations, and covariance matrices of
multivariate arrays. Skewness, kurtosis, and cumulants for 1-d arrays.
cumulantConversion.hh -- conversions between central moments and
cumulants for 1-d distributions.
cumulantUncertainties.hh -- uncertainties for sample cumulants calculated
from population cumulants.
statUncertainties.hh -- uncertainties of various sample statistics.
histoStats.hh -- means and covariance matrices for histograms.
kendallsTau.hh -- Kendall's rank correlation coefficient, from a sample
of points or from copula.
spearmansRho.hh -- Spearman's rank correlation coefficient, from a sample
of points or from copula.
logLikelihoodPeak.hh -- summary of a 1-d log-likelihood curve.
MultivariateSumAccumulator.hh -- classes in these files are
MultivariateSumsqAccumulator.hh intended for calculating
MultivariateWeightedSumAccumulator.hh covariance and correlation
MultivariateWeightedSumsqAccumulator.hh matrices of multivariate data
in a numerically stable manner.
These classes can serve as appropriate accumulator functors in various
"cycleOverRows" methods of AbsNtuple or as separate tools.
SampleAccumulator.hh -- accumulator of items for the purpose of calculating
statistical summaries. For use inside histograms, etc.
WeightedSampleAccumulator.hh -- similar class for use with weighted items.
CircularBuffer.hh -- accumulator of items with fixed length. When this
length is exceeded, the oldest items are discarded. Can calculate
statistical summaries (mean, stdev) that do not require element sorting.
StatAccumulator.hh -- simple, single-pass calculator of mean and standard
deviation. Updates a running average, so it works a bit better than
a "naive" version.
StatAccumulatorPair.hh -- simple, single-pass calculator of mean, standard
deviation, and covariance for two variables.
StatAccumulatorArr.hh -- simple, single-pass calculator of mean and standard
deviation for array sets.
CrossCovarianceAccumulator.hh -- single-pass calculator of covariances
and correlations for samples with elements represented by arrays.
WeightedStatAccumulator.hh -- single-pass calculator of mean and standard
deviation for weighted points.
WeightedStatAccumulatorPair.hh -- simple, single-pass calculator of mean,
standard deviation, and covariance for weighted points.
BinSummary.hh -- a five-number summary for SampleAccumulator, StatAccumulator,
WeightedSampleAccumulator, and WeightedSampleAccumulator which can be
used for making box plots, etc. Allows for direct manipulation of
the center value, upper and lower ranges, and min/max value.
Statistical distributions
-------------------------
AbsDistribution1D.hh -- interface classes for 1-d parametric and tabulated
statistical distributions.
AbsDiscreteDistribution1D.hh -- interface classes for 1-d discrete
statistical distributions. Implemented in DiscreteDistributions1D.hh.
AbsDistributionTransform1D.hh -- interface class for 1-d coordinate
transforms intended for subsequent use in constructing distributions
(in particular, with the TransformedDistribution1D class).
AbsCGF1D.hh -- interface class for 1-d cumulant generating functions.
AsinhTransform1D.hh -- asinh transform (just like the one used to generate
Johnson's S_U curves).
SinhAsinhTransform1D.hh -- transform y = sinh(a + b*asinh(x)).
LogRatioTransform1D.hh -- log(y/(1-y)) transform with scale and location
adjustment (just like the one used to generate Johnson's S_B curves).
LogTransform1D.hh -- transform y = log(1 + x).
AbsDistributionND.hh -- interface classes for multivariate statistical
distributions.
ComparisonDistribution1D.hh -- comparison distributions in one dimension
CompositeDistribution1D.hh -- represents univariate statistical distributions
whose cumulative distribution functions F(x) can be built by composition
of two other cumulative distribution functions: F(x) = G(H(x)).
CompositeDistributionND.hh -- represents multivariate statistical
distributions decomposed into copula and marginals.
Copulas.hh -- distributions which are copulas.
CompositeDistros1D.hh -- several implementations of CompositeDistribution1D.hh
using concrete distributions.
DeltaMixture1D.hh -- a mixture of Dirac delta functions.
DensityOrthoPoly1D.hh -- generate a system of orthonormal polynomials
for an arbitrary density used as the weight.
DistributionMixND.hh -- a mixture of multivariate distributions.
Distributions1D.hh -- a number of continuous 1-d statistical distributions.
DistributionsND.hh -- a number of continuous multivariate statistical
distributions.
DiscreteDistributions1D.hh -- several discrete statistical distributions,
including Poisson and tabulated.
DistributionMix1D.hh -- Mixtures of one-dimensional statistical distributions.
distro1DStats.hh -- a utility for empirical calculation of distribution mean,
standard deviation, skewness, and kurtosis.
EdgeworthSeries1D.hh -- Edgeworth series.
EdgeworthSeriesMethod.hh -- Helper class for defining Edgeworth series.
ExpTiltedDistribution1D.hh -- Exponentially tilted density
(a.k.a. "s-tilted").
+FoldedDistribution1D.hh -- 1-d distributions with support folded into
+ an interval.
+
GaussianMixtureEntry.hh -- Helper class for defining Gaussian mixtures.
GaussianMixture1D.hh -- One-dimensional Gaussian mixtures.
GridRandomizer.hh -- class which knows how to map the unit hypercube into
a distribution whose density is represented on an n-d grid (and, therefore,
how to generate corresponding random numbers). Not intended for direct use
by application code (use class "BinnedDensityND" instead).
IdentityTransform1D.hh -- Identity coordinate transformation.
JohnsonCurves.hh -- Johnson frequency curves.
LeftCensoredDistribution.hh -- left-censored distribution.
LocationScaleFamily1D.hh -- Creates a location-scale family from
a (typically non-scalable) 1-d distribution.
LocationScaleTransform1.hh -- Coordinate transformation of the type
y = (x - mu)/sigma, with mu and sigma depending on a single parameter
and calculated by two separate functors.
PolynomialDistro1D.hh -- statistical distribution constructed using
orthonormal Legendre polynomial series.
RatioOfNormals.hh -- Distribution generated when one Gaussian variable
is divided by another.
RightCensoredDistribution.hh -- right-censored distribution.
saddlepointDistribution1D.hh -- saddlepoint approximation to distributions.
SbMomentsCalculator.hh -- Calculator of moments for S_b curves. Not for use
by application code.
ScalableGaussND.hh -- multivariate Gaussian with diagonal covariance matrix.
SeriesCGF1D.hh -- cumulant generating function implementation with
truncated series using known cumulants.
TransformedDistribution1D.hh -- 1-d distributions in x but whose density,
cdf, etc are specified in the y (transformed) space.
TruncatedDistribution1D.hh -- 1-d distributions with truncated support.
UGaussConvolution1D.hh -- convolution of uniform and Gaussian distributions.
Fitting of parametric models
----------------------------
FitUtils.hh -- fitting of 1-d histograms. See also headers
minuitFitJohnsonCurves.hh and MinuitDensityFitFcn1D.hh in the
"interfaces" directory.
Statistical testing
-------------------
AbsBinnedComparison1D.hh -- interface for comparisons of binned distributions.
AbsUnbinnedGOFTest1D.hh -- interface for one-sample unbinned goodness-of-fit
tests for 1-d distributions.
BinnedADTest1D.hh -- binned version of the Anderson-Darling test.
BinnedKSTest1D.hh -- binned version of the Kolmogorov-Smirnov test.
likelihoodStatisticCumulants.hh -- calculating cumulants for various
signal testing statistics for subsequent use in Edgeworth serires.
LikelihoodStatisticType.hh -- enum for the statistics that can be used to
test for signal presence in mixture models or Poisson process models.
OrthoPolyGOFTest1D.hh -- orthogonal polynomial goodness-of-fit test.
PearsonsChiSquared.hh -- chi-squared goodness-of-fit test.
scannedKSDistance.hh -- Kolmogorov-Smirnov distance between two (oracle)
1-d distributions.
SmoothGOFTest1D.hh -- smooth test for goodness-of-fit.
UnbinnedGOFTests1D.hh -- a variety of goodness-of-fit tests (KS, AD,
Cramer-von Mises, Zhang's Z_K, Z_A, and Z_C).
UnbinnedGOFTest1DFactory.hh -- a factory for creating a number of GoF
tests from a uniform interface.
Local filtering
---------------
AbsFilter1DBuilder.hh -- interface classes for building local polynomial
filters in 1d. Implemented in Filter1DBuilders.hh, BetaFilter1DBuilder.hh,
WeightTableFilter1DBuilder.hh, BernsteinFilter1DBuilder.hh,
DiscreteGauss1DBuilder.hh, MatrixFilter1DBuilder.hh. Used by
LocalPolyFilter1D.hh.
AbsPolyFilter1D.hh -- interface class for building univariate smoothers
that can be optimized by cross-validation. Implemented in
ConstantBandwidthSmoother1D.hh, LocalPolyFilter1D.hh.
AbsPolyFilterND.hh -- interface class for building multivariate smoothers
that can be optimized by cross-validation. Implemented in
LocalPolyFilterND.hh, SequentialPolyFilterND.hh, and KDEFilterND.hh.
Used by AbsBandwidthCV.hh, BandwidthCVLeastSquaresND.hh,
BandwidthCVPseudoLogliND.hh.
AbsSymbetaFilterProvider.hh -- interface class for building local polynomial
filters in 1d using kernels from the symmetric beta family.
MemoizingSymbetaFilterProvider.hh -- implements AbsSymbetaFilterProvider
interface and allows for filter storage and lookup.
BernsteinFilter1DBuilder.hh -- concrete class for building filters which
smooth densities using Bernstein polynomials.
BetaFilter1DBuilder.hh -- concrete class for building filters which
smooth densities using beta functions (Bernstein polynomials of
non-integer degree).
betaKernelsBandwidth.hh -- optimal bandwidth for density estimation with beta
kernels.
BoundaryHandling.hh -- user API for handling LOrPE boundary methods.
BoundaryMethod.hh -- enums for handling LOrPE boundary methods.
continuousDegreeTaper.hh -- a method for generating tapers with effectively
continuous degree. Intended for use with LocalPolyFilter1D.
correctDensityEstimateGHU.hh -- Glad-Hjort-Ushakov correction for density
estimates that can be negative
DiscreteGauss1DBuilder.hh -- concrete class for building filters which
smooth densities using the Green's function of the discretized heat
equation.
Filter1DBuilders.hh -- concrete classes for building local polynomial
filters in 1d. They differ by their treatment of the weight function
and boundary effects.
MatrixFilter1DBuilder.hh -- building a local polynomial filter from
a filtering matrix calculated by other code.
WeightTableFilter1DBuilder.hh -- concrete classes for building local
polynomial filters in 1d from density scans.
KDEFilterND.hh -- KDE filtering (Nadaraya-Watson regression) on a regularly
spaced 1-d grid.
LocalPolyFilter1D.hh -- local polynomial filtering (regression) on a regularly
spaced 1-d grid.
LocalPolyFilterND.hh -- local polynomial filtering (regression) on a regularly
spaced multivariate grid.
LocalMultiFilter1D.hh -- local polynomial filtering with separate polynomials
from an orthogonal set.
LocalQuadraticLeastSquaresND.hh -- local quadratic polynomial filtering for
an irregular set of points (possibly including uncertainties).
lorpeSmooth1D.hh -- high level driver for LocalPolyFilter1D, etc. Intended
for density reconstruction from histograms.
lorpeBackground1D.hh -- high level driver for fitting mixed models in which
signal is parameterized and background is nonparametric.
lorpeBackgroundCVDensity1D.hh -- linearization of cross-validation calculations
for fitting mixed models with nonparametric background.
QuadraticOrthoPolyND.hh -- local quadratic polynomial filtering on a grid.
In comparison with LocalPolyFilterND.hh, supports a finer interface to
filtering functionality (direct support of an AbsDistributionND as
a weight, calculations of gradient and hessian for the fitted surface,
fitting is performed on functors rather than ArrayND objects, etc).
Used by LocalLogisticRegression.hh.
SequentialPolyFilterND.hh -- similar to LocalPolyFilterND.hh, but the
filtering is performed sequentially for each dimension using 1-d filters.
SymbetaPolyCollection1D.hh -- class that builds LocalPolyFilter1D objects
and memoizes local polynomials for the bandwidth values used.
Nonparametric density estimation
--------------------------------
AbsBandwidthCV.hh -- interface classes for calculating 1-d and multivariate
cross-validation criteria for bandwidth and taper selection. Interfaces
declared in this file are implemented in BandwidthCVLeastSquares1D.hh,
BandwidthCVLeastSquaresND.hh, BandwidthCVPseudoLogli1D.hh, and
BandwidthCVPseudoLogliND.hh. These interfaces are used by classes in
CVCopulaSmoother.hh.
AbsBandwidthGCV.hh -- interface classes for calculating 1-d and multivariate
cross-validation criteria for bandwidth and taper selection. Interfaces
declared in this file are implemented in BandwidthGCVLeastSquares1D.hh,
BandwidthGCVLeastSquaresND.hh, BandwidthGCVPseudoLogli1D.hh, and
BandwidthGCVPseudoLogliND.hh. These interfaces are used by classes in
GCVCopulaSmoother.hh. The difference with the series of classes defined
in "AbsBandwidthCV.hh" is that the grouping (i.e., the binning) of data
is explicitly acknowledged, so that a substantially different set of
filters (removing the whole group) can be used for cross-validation.
AbsCompositeDistroBuilder.hh -- interface class for building composite
distrubutions (which consist of copula and marginals) out of data samples.
Implemented in DummyCompositeDistroBuilder.hh and
NonparametricCompositeBuilder.hh.
AbsDistro1DBuilder.hh -- interface class for building 1-d distributions out
of data samples. Implemented in DummyDistro1DBuilder.hh and
NonparametricDistro1DBuilder.hh.
AbsCopulaSmootherBase.hh -- interface class for building copulas out of data
samples. Implemented in AbsCVCopulaSmoother.hh. Used by
NonparametricCompositeBuilder.hh.
AbsKDE1DKernel.hh -- interface class for simple, brute-force KDE in 1-d
without discretization or boundary correction. Implemented in
KDE1DHOSymbetaKernel.hh.
AbsMarginalSmootherBase.hh -- interface class for building 1-d smoothers of
histograms. Implemented in JohnsonKDESmoother.hh, LOrPEMarginalSmoother.hh,
ConstantBandwidthSmoother1D.hh, and VariableBandwidthSmoother1D.hh. Used
by NonparametricCompositeBuilder.hh.
AbsResponseIntervalBuilder.hh -- interface class for making cuts in the
inivariate response space when density estimation is performed in
the regression context. Implemented in DummyResponseIntervalBuilder.hh
and RatioResponseIntervalBuilder.hh.
AbsResponseBoxBuilder.hh -- interface class for making cuts in the
multivariate response space when density estimation is performed
in the regression context. Implemented in DummyResponseBoxBuilder.hh
and RatioResponseBoxBuilder.hh.
amiseOptimalBandwidth.hh -- function for selecting optimal LOrPE bandwidth
values by optimizing AMISE on a reference distribution. Used in
JohnsonKDESmoother.cc and ConstantBandwidthSmoother1D.cc.
Can also be used by application code.
BandwidthCVLeastSquares1D.hh -- class for calculating KDE or LOrPE
cross-validation MISE approximations for 1-d density estimates.
BandwidthCVLeastSquaresND.hh -- class for calculating KDE or LOrPE
cross-validation MISE approximations for multivariate density estimates.
BandwidthCVPseudoLogli1D.hh -- class for calculating KDE or LOrPE
cross-validation pseudo log likelihood, for 1-d density estimates.
BandwidthCVPseudoLogliND.hh -- Class for calculating KDE or LOrPE
cross-validation pseudo log likelihood, for multivariate density estimates.
buildInterpolatedCompositeDistroND.hh -- Multivariate density estimation
in the regression context, with interpolation.
buildInterpolatedDistro1DNP.hh -- Univariate density estimation
in the regression context, with interpolation.
ConstantBandwidthSmoother1D.hh -- 1-d KDE implementation with constant
bandwidth. Implements AbsMarginalSmoother interface.
ConstantBandwidthSmootherND.hh -- multivariate KDE implementation with
constant bandwidth.
CVCopulaSmoother.hh -- an interface to copula smoothers which use constant
bandwidth LOrPE and select bandwidth by cross-validation. Implemented
in LOrPECopulaSmoother.hh, SequentialCopulaSmoother.hh,
KDECopulaSmoother.hh, DiscreteGaussCopulaSmoother.hh, and
BernsteinCopulaSmoother.hh. Could be used by application code if it
needs to develop its own cross-validation method for nonparametric
copula estimation.
GCVCopulaSmoother.hh -- an interface to copula smoothers working with
grouped data and using substantially different filters for
cross-validation. Implemented in KDEGroupedCopulaSmoother.hh,
LOrPEGroupedCopulaSmoother.hh, and SequentialGroupedCopulaSmoother.hh.
empiricalCopula.hh -- functions for building empirical copulas by constructing
kd-tree for the data points and then doing lookups in this tree.
empiricalCopulaHisto.hh -- function for building empirical copula densities
by ordering the data points in multiple dimensions.
weightedCopulaHisto.hh -- function for building empirical copula densities
by ordering weighted data points in multiple dimensions.
HistoNDCdf.hh -- multivariate cumulative distribution function built
from a histogram. Its "coveringBox" method can be used to make
k-NN type density estimates (and for other purposes).
JohnsonKDESmoother.hh -- 1-d KDE implementation with adaptive bandwidth
(see comments in the header file for details). Implements
AbsMarginalSmoother interface. See also "fitCompositeJohnson.hh"
header in the "interfaces" directory for an alternative approach.
KDE1D.hh -- Convenience class which aggregates the kernel and the data
for brute-force 1-d KDE without boundary correction.
KDE1DCV.hh -- Cross-validation utilities for brute-force KDE in 1-d.
KDE1DHOSymbetaKernel.hh -- high order Gaussian or symmetric beta kernels
for brute-force KDE in 1-d.
KDECopulaSmoother.hh -- constant bandwidth multivariate KDE copula
smoother in which the bandwidth is selected by cross-validation.
Implements CVCopulaSmoother.
kernelSensitivityMatrix.hh -- calculation of the sensitivity matrix
for KDE-like density estimation.
+LOrPE1D.hh -- Convenience class which aggregates the kernel and the data
+ for unbinned LOrPE in one dimension.
+
+LOrPE1DSymbetaKernel.hh -- high order Gaussian or symmetric beta kernels
+ for unbinned LOrPE in one dimension.
+
LOrPECopulaSmoother.hh -- constant bandwidth multivariate LOrPE copula
smoother in which the bandwidth is selected by cross-validation.
Implements CVCopulaSmoother.
LOrPEMarginalSmoother.hh -- 1-d LOrPE for fitting margins of composite
distributions. Basically, interfaces "lorpeSmooth1D" to AbsMarginalSmoother.
lorpeMise1D.hh -- Deterministic MISE calculation for reconstructing
an arbitrary 1-d density.
NonparametricCompositeBuilder.hh -- an implementation of
AbsCompositeDistroBuilder. Uses separate density estimation procedures
for copula and marginals.
orthoPoly1DVProducts.hh -- utility functions for calculating certain
statistical properties of 1-d orthogonal polynomials.
OSDE1D.hh -- orthogonal series density estimation in one dimension.
PolyFilterCollection1D.hh -- collection of LocalPolyFilter1D objects with
the same kernel but different bandwidth values. Intended for use with
bandwidth scans (for example, in cross-validation scenarios).
QuantileTable1D.hh -- density function defined by its quantile table.
Can be easily constructed using "empiricalQuantile" function from
StatUtils.hh.
SequentialCopulaSmoother.hh -- similar to LOrPECopulaSmoother, but the
filters are limited to tensor products of univariate filters.
variableBandwidthSmooth1D.hh -- KDE with adaptive bandwidth. Used by
JohnsonKDESmoother.hh.
Deconvolution density estimation (Unfolding)
--------------------------------------------
AbsUnfold1D.hh -- interface class for deconvolution density estimation in 1-d
(a.k.a. unfolding).
AbsUnfoldND.hh -- interface class for multivariate deconvolution density
estimation (a.k.a. unfolding).
AbsUnfoldingFilterND.hh -- interface class for smoothers used in multivariate
unfolding.
gaussianResponseMatrix.hh -- helper function for building response matrices
for one-dimensional unfolding problems.
MultiscaleEMUnfold1D.hh -- a variation of 1-d unfolding algorithm with
multiscale filtering and, potentially, faster convergence.
productResponseMatrix.hh -- helper function for building sparse response
matrices for multivariate unfolding problems.
ResponseMatrix.hh -- sparse response matrix representation for multivariate
unfolding.
SmoothedEMUnfold1D.hh -- expectation-maximization (a.k.a. D'Agostini)
unfolding with smoothing for 1-d distributions.
SmoothedEMUnfoldND.hh -- expectation-maximization unfolding with smoothing
for multivariate distributions.
UnfoldingBandwidthScanner1D.hh -- class which gets various information from
1-d unfolding results in a convenient form.
UnfoldingBandwidthScannerND.hh -- class which gets various information from
multivariate unfolding results in a convenient form.
Nonparametric regression
------------------------
LocalLogisticRegression.hh -- facilities for performing local linear and
quadratic logistic regression. The interface is designed for use
together with Minuit. See also the header "minuitLocalRegression.hh"
in the "interfaces" directory.
QuantileRegression1D.hh -- nonparametric quantile regression with one
predictor. Supports polynomials of arbitrary degrees. Useful for
constructing Neyman belts. See also "minuitLocalQuantileRegression1D.hh"
header in the "interfaces" directory.
LocalQuantileRegression.hh -- multivariate local linear or quadratic
quantile regression. Can be used to fit histograms or collections
of points. See also "minuitQuantileRegression.hh" header in the
"interfaces" directory.
CensoredQuantileRegression.hh -- multivariate local linear or quadratic
quantile regression which can be used for data samples affected by
a one-sided cut.
griddedRobustRegression.hh -- framework for local robust regression
(in particular, for local least trimmed squares).
GriddedRobustRegressionStop.hh -- simple functor for stopping robust
regression sequence.
AbsLossCalculator.hh -- abstract class for calculating local loss for
local robust regression. Implemented in "WeightedLTSLoss.hh" and
"TwoPointsLTSLoss.hh".
WeightedLTSLoss.hh -- functor for calculating local least trimmed squares
with one point removed.
TwoPointsLTSLoss.hh -- functor for calculating local least trimmed squares
with two points or 1-d stripes removed.
Interpolation of statistical distributions
------------------------------------------
AbsGridInterpolatedDistribution.hh -- interface class for interpolating
between probability distributions placed at the points of a rectangular
parameter grid. Implemented in GridInterpolatedDistribution.hh. To be
used by application code.
AbsInterpolatedDistribution1D.hh -- interface class for univariate density
interpolation algorithms. Implemented by InterpolatedDistribution1D.hh
and VerticallyInterpolatedDistribution1D.hh.
AbsInterpolationAlgoND.hh -- interface class for multivariate density
interpolation algorithms. Implemented by CopulaInterpolationND.hh
and UnitMapInterpolationND.hh. Used by GridInterpolatedDistribution.hh.
CopulaInterpolationND.hh -- interpolation of distributions represented by
CompositeDistributionND. Copulas and quantile functions of the marginals
are combined with externally provided weights.
UnitMapInterpolationND.hh -- interpolation of distributions mapped to the
unit cube by conditional quantile functions.
GridInterpolatedDistribution.hh -- class which represents a complete
multivariate distribution interpolated in parameters. Constructed
incrementally, by adding distributions to the grid points.
InterpolatedDistribution1D.hh -- 1-d continuous statistical distribution
which interpolates between other distributions by performing linear
interpolation of the quantile function.
InterpolatedDistro1D1P.hh -- 1-d continuous statistical distribution
interpolation on a 1-d parameter grid, with linear interpolation
of weights between parameter values. Supports both interpolation
of quantile functions and vertical interpolation.
InterpolatedDistro1DNP.hh -- 1-d continuous statistical distribution
interpolation on a multivariate parameter grid, with multilinear
interpolation of weights between parameter values. Supports both
interpolation of quantile functions and vertical interpolation.
UnitMapInterpolationND.hh -- this class interpolates between multivariate
distributions by interpolating between their unit maps.
Miscellaneous data analysis techniques
--------------------------------------
neymanPearsonWindow1D.hh -- search for likelihood ratio maximum and
determination of optimal cuts in 1-d based on likelihood ratio
between signal and background.
Convenience API
---------------
DensityScan1D.hh -- utility class for discretizing 1-d densities.
DensityScanND.hh -- functor for filling multidimensional arrays with
multivariate density scans. Calculates the density in the bin center.
discretizationErrorND.hh -- function for calculating the ISE due to
discretization of multivariate densities.
DensityAveScanND.hh -- functor for filling multidimensional arrays with
multivariate density scans. Integrates the density over the bin area.
Distribution1DFactory.hh -- creation of a number of 1-d distributions from
a uniform interface.
scanSymmetricDensityAsWeight.hh -- determines density support and scans
a multivariate density in a manner suitable for subsequent construction
of orthogonal polynomial systems. Fills one quadrant (octant, etc) only.
scanMultivariateDensityAsWeight.hh -- determines density support and scans
a multivariate density in a manner suitable for subsequent construction
of orthogonal polynomial systems. Performs a complete scan.
Utilities
---------
AllSymbetaParams1D.hh -- complete set of parameters for building 1-d filters
from the symmetric beta family.
buildInterpolatedHelpers.hh -- utilities for nonparametric interpolation
of statistical distributions. Not for use by application code.
histoUtils.hh -- utilities related to special ways of filling histograms, etc.
mirrorWeight.hh -- helper function for scanning multivariate densities.
Used by LocalPolyFilterND and KDEFilterND codes.
multinomialCovariance1D.hh -- helper function for building multinomial
distribution covariance matrices.
NMCombinationSequencer.hh -- helper class for a certain type of integer
permutations (distinct ways of choosing M out of N objects).
StatUtils.hh -- a few useful functions which did not fit naturally
anywhere else.
SymbetaParams1D.hh -- collects the parameters of symmetric beta kernels.
volumeDensityFromBinnedRadial.hh -- convert a density which was obtained
from a histogram of radius values into the density per unit area
(or per unit volume or hypervolume).
WeightedDistro1DPtr.hh -- associates a pointer to AbsDistribution1D with
a weight. Not for use by application code.
I/O
---
Distribution1DReader.hh -- factory for deserializing 1-d distribution functions.
DistributionNDReader.hh -- factory for deserializing N-d distribution functions.
distributionReadError.hh -- this code throws an appropriate exception if
input I/O operations fail for a distribution previously stored on disk.
DiscreteDistribution1DReader.hh -- factory for deserializing 1-d discrete
distributions.
DistributionTransform1DReader.hh -- factory for deserializing 1-d transforms.
fillHistoFromText.hh -- utility for filling histograms from text files
similar utility for ntuples in declared in the AbsNtuple.hh header).
LocalPolyFilter1DReader.hh -- a reader factory for classes derived from
LocalPolyFilter1D.
NtupleRecordTypes.hh -- mechanisms for locating parts of the ArchivedNtuple
NtupleRecordTypesFwd.hh in the archive. Not for use by application code.
NtupleReference.hh -- special reference type for ArchivedNtuple.
StorableMultivariateFunctorReader.hh -- factory for deserializing for
storable multivariate functors.
UnfoldingFilterNDReader.hh -- reader factory for classes derived from
AbsUnfoldingFilterND.
Index: trunk/config.log
===================================================================
--- trunk/config.log (revision 776)
+++ trunk/config.log (revision 777)
@@ -1,970 +1,970 @@
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by npstat configure 5.6.0, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --disable-static --with-pic
## --------- ##
## Platform. ##
## --------- ##
hostname = dawn
uname -m = x86_64
uname -r = 5.4.0-113-generic
uname -s = Linux
uname -v = #127-Ubuntu SMP Wed May 18 14:30:56 UTC 2022
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /home/igv/bin
PATH: /home/igv/local/bin
PATH: /home/igv/.local/bin
PATH: /usr/local/anaconda3/bin
PATH: /usr/local/bin
PATH: /usr/local/root/bin
PATH: /usr/local/bin
PATH: /bin
PATH: /usr/bin
PATH: /sbin
PATH: /usr/sbin
PATH: .
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2417: checking for a BSD-compatible install
configure:2485: result: /usr/bin/install -c
configure:2496: checking whether build environment is sane
configure:2551: result: yes
configure:2700: checking for a thread-safe mkdir -p
configure:2739: result: /bin/mkdir -p
configure:2746: checking for gawk
configure:2762: found /usr/bin/gawk
configure:2773: result: gawk
configure:2784: checking whether make sets $(MAKE)
configure:2806: result: yes
configure:2835: checking whether make supports nested variables
configure:2852: result: yes
configure:3036: checking for pkg-config
configure:3054: found /usr/bin/pkg-config
configure:3066: result: /usr/bin/pkg-config
configure:3091: checking pkg-config is at least version 0.9.0
configure:3094: result: yes
configure:3104: checking for DEPS
configure:3111: $PKG_CONFIG --exists --print-errors "fftw3 >= 3.1.2 geners >= 1.3.0 kstest >= 2.0.0"
configure:3114: $? = 0
configure:3128: $PKG_CONFIG --exists --print-errors "fftw3 >= 3.1.2 geners >= 1.3.0 kstest >= 2.0.0"
configure:3131: $? = 0
configure:3189: result: yes
configure:3252: checking for g++
configure:3268: found /usr/bin/g++
configure:3279: result: g++
configure:3306: checking for C++ compiler version
configure:3315: g++ --version >&5
g++ (Ubuntu 9.4.0-1ubuntu1~20.04.1) 9.4.0
Copyright (C) 2019 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3326: $? = 0
configure:3315: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:hsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 9.4.0-1ubuntu1~20.04.1' --with-bugurl=file:///usr/share/doc/gcc-9/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-9 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-9-Av3uEd/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 9.4.0 (Ubuntu 9.4.0-1ubuntu1~20.04.1)
configure:3326: $? = 0
configure:3315: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:3326: $? = 1
configure:3315: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'; did you mean '--version'?
g++: fatal error: no input files
compilation terminated.
configure:3326: $? = 1
configure:3346: checking whether the C++ compiler works
configure:3368: g++ -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:3372: $? = 0
configure:3420: result: yes
configure:3423: checking for C++ compiler default output file name
configure:3425: result: a.out
configure:3431: checking for suffix of executables
configure:3438: g++ -o conftest -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:3442: $? = 0
configure:3464: result:
configure:3486: checking whether we are cross compiling
configure:3494: g++ -o conftest -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:3498: $? = 0
configure:3505: ./conftest
configure:3509: $? = 0
configure:3497: result: no
configure:3502: checking for suffix of object files
configure:3524: g++ -c -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:3528: $? = 0
configure:3549: result: o
configure:3553: checking whether we are using the GNU C++ compiler
configure:3572: g++ -c -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:3572: $? = 0
configure:3581: result: yes
configure:3590: checking whether g++ accepts -g
configure:3610: g++ -c -g conftest.cpp >&5
configure:3610: $? = 0
configure:3651: result: yes
configure:3677: checking whether make supports the include directive
configure:3692: make -f confmf.GNU && cat confinc.out
this is the am__doit target
configure:3695: $? = 0
configure:3714: result: yes (GNU style)
configure:3739: checking dependency style of g++
configure:3850: result: gcc3
configure:3919: checking for g77
configure:3935: found /home/igv/bin/g77
configure:3946: result: g77
configure:3972: checking for Fortran 77 compiler version
configure:3981: g77 --version >&5
GNU Fortran (Ubuntu 9.4.0-1ubuntu1~20.04.1) 9.4.0
Copyright (C) 2019 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3992: $? = 0
configure:3981: g77 -v >&5
Using built-in specs.
COLLECT_GCC=g77
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:hsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 9.4.0-1ubuntu1~20.04.1' --with-bugurl=file:///usr/share/doc/gcc-9/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-9 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-9-Av3uEd/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 9.4.0 (Ubuntu 9.4.0-1ubuntu1~20.04.1)
configure:3992: $? = 0
configure:3981: g77 -V >&5
g77: error: unrecognized command line option '-V'
g77: fatal error: no input files
compilation terminated.
configure:3992: $? = 1
configure:3981: g77 -qversion >&5
g77: error: unrecognized command line option '-qversion'; did you mean '--version'?
g77: fatal error: no input files
compilation terminated.
configure:3992: $? = 1
configure:4001: checking whether we are using the GNU Fortran 77 compiler
configure:4014: g77 -c conftest.F >&5
configure:4014: $? = 0
configure:4023: result: yes
configure:4029: checking whether g77 accepts -g
configure:4040: g77 -c -g conftest.f >&5
configure:4040: $? = 0
configure:4048: result: yes
configure:4081: checking build system type
configure:4095: result: x86_64-pc-linux-gnu
configure:4115: checking host system type
configure:4128: result: x86_64-pc-linux-gnu
configure:4153: checking how to get verbose linking output from g77
configure:4163: g77 -c -g -O2 conftest.f >&5
configure:4163: $? = 0
configure:4181: g77 -o conftest -g -O2 -v conftest.f
Using built-in specs.
Target: x86_64-linux-gnu
Thread model: posix
gcc version 9.4.0 (Ubuntu 9.4.0-1ubuntu1~20.04.1)
- /usr/lib/gcc/x86_64-linux-gnu/9/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/9/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/ccPFdvC6.s
+ /usr/lib/gcc/x86_64-linux-gnu/9/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/9/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/cckBrjgi.s
GNU Fortran (Ubuntu 9.4.0-1ubuntu1~20.04.1) version 9.4.0 (x86_64-linux-gnu)
compiled by GNU C version 9.4.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version isl-0.22.1-GMP
warning: GMP header version 6.2.0 differs from library version 6.2.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (Ubuntu 9.4.0-1ubuntu1~20.04.1) version 9.4.0 (x86_64-linux-gnu)
compiled by GNU C version 9.4.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version isl-0.22.1-GMP
warning: GMP header version 6.2.0 differs from library version 6.2.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
- as -v --64 -o /tmp/ccxZmPoa.o /tmp/ccPFdvC6.s
+ as -v --64 -o /tmp/ccKykEUi.o /tmp/cckBrjgi.s
GNU assembler version 2.34 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.34
Reading specs from /usr/lib/gcc/x86_64-linux-gnu/9/libgfortran.spec
rename spec lib to liborig
- /usr/lib/gcc/x86_64-linux-gnu/9/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/9/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper -plugin-opt=-fresolution=/tmp/ccbxAvba.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/9/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. /tmp/ccxZmPoa.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crtn.o
+ /usr/lib/gcc/x86_64-linux-gnu/9/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/9/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper -plugin-opt=-fresolution=/tmp/ccRfgSij.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/9/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. /tmp/ccKykEUi.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crtn.o
configure:4264: result: -v
configure:4266: checking for Fortran 77 libraries of g77
configure:4289: g77 -o conftest -g -O2 -v conftest.f
Using built-in specs.
Target: x86_64-linux-gnu
Thread model: posix
gcc version 9.4.0 (Ubuntu 9.4.0-1ubuntu1~20.04.1)
- /usr/lib/gcc/x86_64-linux-gnu/9/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/9/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/ccPMlhuf.s
+ /usr/lib/gcc/x86_64-linux-gnu/9/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/9/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/cc7AlL7p.s
GNU Fortran (Ubuntu 9.4.0-1ubuntu1~20.04.1) version 9.4.0 (x86_64-linux-gnu)
compiled by GNU C version 9.4.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version isl-0.22.1-GMP
warning: GMP header version 6.2.0 differs from library version 6.2.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (Ubuntu 9.4.0-1ubuntu1~20.04.1) version 9.4.0 (x86_64-linux-gnu)
compiled by GNU C version 9.4.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version isl-0.22.1-GMP
warning: GMP header version 6.2.0 differs from library version 6.2.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
- as -v --64 -o /tmp/cctdyLyi.o /tmp/ccPMlhuf.s
+ as -v --64 -o /tmp/ccZsOzxo.o /tmp/cc7AlL7p.s
GNU assembler version 2.34 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.34
Reading specs from /usr/lib/gcc/x86_64-linux-gnu/9/libgfortran.spec
rename spec lib to liborig
- /usr/lib/gcc/x86_64-linux-gnu/9/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/9/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper -plugin-opt=-fresolution=/tmp/ccI6Ovzf.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/9/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. /tmp/cctdyLyi.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crtn.o
+ /usr/lib/gcc/x86_64-linux-gnu/9/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/9/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper -plugin-opt=-fresolution=/tmp/ccQvi7jq.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/9/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. /tmp/ccZsOzxo.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/crtn.o
configure:4485: result: -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath
configure:4547: checking how to print strings
configure:4574: result: printf
configure:4643: checking for gcc
configure:4659: found /usr/bin/gcc
configure:4670: result: gcc
configure:4899: checking for C compiler version
configure:4908: gcc --version >&5
gcc (Ubuntu 9.4.0-1ubuntu1~20.04.1) 9.4.0
Copyright (C) 2019 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:4919: $? = 0
configure:4908: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:hsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 9.4.0-1ubuntu1~20.04.1' --with-bugurl=file:///usr/share/doc/gcc-9/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-9 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-9-Av3uEd/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 9.4.0 (Ubuntu 9.4.0-1ubuntu1~20.04.1)
configure:4919: $? = 0
configure:4908: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:4919: $? = 1
configure:4908: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'; did you mean '--version'?
gcc: fatal error: no input files
compilation terminated.
configure:4919: $? = 1
configure:4923: checking whether we are using the GNU C compiler
configure:4942: gcc -c conftest.c >&5
configure:4942: $? = 0
configure:4951: result: yes
configure:4960: checking whether gcc accepts -g
configure:4980: gcc -c -g conftest.c >&5
configure:4980: $? = 0
configure:5021: result: yes
configure:5038: checking for gcc option to accept ISO C89
configure:5101: gcc -c -g -O2 conftest.c >&5
configure:5101: $? = 0
configure:5114: result: none needed
configure:5139: checking whether gcc understands -c and -o together
configure:5161: gcc -c conftest.c -o conftest2.o
configure:5164: $? = 0
configure:5161: gcc -c conftest.c -o conftest2.o
configure:5164: $? = 0
configure:5176: result: yes
configure:5195: checking dependency style of gcc
configure:5306: result: gcc3
configure:5321: checking for a sed that does not truncate output
configure:5385: result: /bin/sed
configure:5403: checking for grep that handles long lines and -e
configure:5461: result: /bin/grep
configure:5466: checking for egrep
configure:5528: result: /bin/grep -E
configure:5533: checking for fgrep
configure:5595: result: /bin/grep -F
configure:5630: checking for ld used by gcc
configure:5697: result: /usr/bin/ld
configure:5704: checking if the linker (/usr/bin/ld) is GNU ld
configure:5719: result: yes
configure:5731: checking for BSD- or MS-compatible name lister (nm)
configure:5785: result: /usr/bin/nm -B
configure:5915: checking the name lister (/usr/bin/nm -B) interface
configure:5922: gcc -c -g -O2 conftest.c >&5
configure:5925: /usr/bin/nm -B "conftest.o"
configure:5928: output
0000000000000000 B some_variable
configure:5929: result: BSD nm
configure:5932: checking whether ln -s works
configure:5936: result: yes
configure:5944: checking the maximum length of command line arguments
configure:6075: result: 1572864
configure:6123: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format
configure:6163: result: func_convert_file_noop
configure:6170: checking how to convert x86_64-pc-linux-gnu file names to toolchain format
configure:6190: result: func_convert_file_noop
configure:6197: checking for /usr/bin/ld option to reload object files
configure:6204: result: -r
configure:6278: checking for objdump
configure:6294: found /usr/bin/objdump
configure:6305: result: objdump
configure:6337: checking how to recognize dependent libraries
configure:6537: result: pass_all
configure:6622: checking for dlltool
configure:6652: result: no
configure:6682: checking how to associate runtime and link libraries
configure:6709: result: printf %s\n
configure:6770: checking for ar
configure:6786: found /usr/bin/ar
configure:6797: result: ar
configure:6834: checking for archiver @FILE support
configure:6851: gcc -c -g -O2 conftest.c >&5
configure:6851: $? = 0
configure:6854: ar cru libconftest.a @conftest.lst >&5
ar: `u' modifier ignored since `D' is the default (see `U')
configure:6857: $? = 0
configure:6862: ar cru libconftest.a @conftest.lst >&5
ar: `u' modifier ignored since `D' is the default (see `U')
ar: conftest.o: No such file or directory
configure:6865: $? = 1
configure:6864: result: @
configure:6922: checking for strip
configure:6938: found /usr/bin/strip
configure:6949: result: strip
configure:7021: checking for ranlib
configure:7037: found /usr/bin/ranlib
configure:7048: result: ranlib
configure:7150: checking command to parse /usr/bin/nm -B output from gcc object
configure:7303: gcc -c -g -O2 conftest.c >&5
configure:7306: $? = 0
configure:7310: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:7313: $? = 0
configure:7379: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
configure:7382: $? = 0
configure:7420: result: ok
configure:7467: checking for sysroot
configure:7497: result: no
configure:7504: checking for a working dd
configure:7542: result: /bin/dd
configure:7546: checking how to truncate binary pipes
configure:7561: result: /bin/dd bs=4096 count=1
configure:7697: gcc -c -g -O2 conftest.c >&5
configure:7700: $? = 0
configure:7890: checking for mt
configure:7906: found /bin/mt
configure:7917: result: mt
configure:7940: checking if mt is a manifest tool
configure:7946: mt '-?'
configure:7954: result: no
configure:8631: checking how to run the C preprocessor
configure:8662: gcc -E conftest.c
configure:8662: $? = 0
configure:8676: gcc -E conftest.c
conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory
11 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:8676: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "npstat"
| #define PACKAGE_TARNAME "npstat"
| #define PACKAGE_VERSION "5.6.0"
| #define PACKAGE_STRING "npstat 5.6.0"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define PACKAGE "npstat"
| #define VERSION "5.6.0"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:8701: result: gcc -E
configure:8721: gcc -E conftest.c
configure:8721: $? = 0
configure:8735: gcc -E conftest.c
conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory
11 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:8735: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "npstat"
| #define PACKAGE_TARNAME "npstat"
| #define PACKAGE_VERSION "5.6.0"
| #define PACKAGE_STRING "npstat 5.6.0"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define PACKAGE "npstat"
| #define VERSION "5.6.0"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:8764: checking for ANSI C header files
configure:8784: gcc -c -g -O2 conftest.c >&5
configure:8784: $? = 0
configure:8857: gcc -o conftest -g -O2 conftest.c >&5
configure:8857: $? = 0
configure:8857: ./conftest
configure:8857: $? = 0
configure:8868: result: yes
configure:8881: checking for sys/types.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for sys/stat.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for stdlib.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for string.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for memory.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for strings.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for inttypes.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for stdint.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8881: checking for unistd.h
configure:8881: gcc -c -g -O2 conftest.c >&5
configure:8881: $? = 0
configure:8881: result: yes
configure:8895: checking for dlfcn.h
configure:8895: gcc -c -g -O2 conftest.c >&5
configure:8895: $? = 0
configure:8895: result: yes
configure:9162: checking for objdir
configure:9177: result: .libs
configure:9441: checking if gcc supports -fno-rtti -fno-exceptions
configure:9459: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C
configure:9463: $? = 0
configure:9476: result: no
configure:9834: checking for gcc option to produce PIC
configure:9841: result: -fPIC -DPIC
configure:9849: checking if gcc PIC flag -fPIC -DPIC works
configure:9867: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5
configure:9871: $? = 0
configure:9884: result: yes
configure:9913: checking if gcc static flag -static works
configure:9941: result: yes
configure:9956: checking if gcc supports -c -o file.o
configure:9977: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:9981: $? = 0
configure:10003: result: yes
configure:10011: checking if gcc supports -c -o file.o
configure:10058: result: yes
configure:10091: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:11350: result: yes
configure:11387: checking whether -lc should be explicitly linked in
configure:11395: gcc -c -g -O2 conftest.c >&5
configure:11398: $? = 0
configure:11413: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1
configure:11416: $? = 0
configure:11430: result: no
configure:11590: checking dynamic linker characteristics
configure:12171: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5
configure:12171: $? = 0
configure:12408: result: GNU/Linux ld.so
configure:12530: checking how to hardcode library paths into programs
configure:12555: result: immediate
configure:13103: checking whether stripping libraries is possible
configure:13108: result: yes
configure:13143: checking if libtool supports shared libraries
configure:13145: result: yes
configure:13148: checking whether to build shared libraries
configure:13173: result: yes
configure:13176: checking whether to build static libraries
configure:13180: result: no
configure:9995: checking how to run the C++ preprocessor
configure:10022: g++ -E conftest.cpp
configure:10022: $? = 0
configure:10036: g++ -E conftest.cpp
conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory
23 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:10036: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "npstat"
| #define PACKAGE_TARNAME "npstat"
| #define PACKAGE_VERSION "5.6.0"
| #define PACKAGE_STRING "npstat 5.6.0"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define PACKAGE "npstat"
| #define VERSION "5.6.0"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10061: result: g++ -E
configure:10081: g++ -E conftest.cpp
configure:10081: $? = 0
configure:10095: g++ -E conftest.cpp
conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory
23 | #include <ac_nonexistent.h>
| ^~~~~~~~~~~~~~~~~~
compilation terminated.
configure:10095: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "npstat"
| #define PACKAGE_TARNAME "npstat"
| #define PACKAGE_VERSION "5.6.0"
| #define PACKAGE_STRING "npstat 5.6.0"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define PACKAGE "npstat"
| #define VERSION "5.6.0"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10257: checking for ld used by g++
configure:10324: result: /usr/bin/ld -m elf_x86_64
configure:10331: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld
configure:10346: result: yes
configure:10401: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:11474: result: yes
configure:11510: g++ -c -std=c++11 -O3 -Wall -W -Werror conftest.cpp >&5
configure:11513: $? = 0
configure:11994: checking for g++ option to produce PIC
configure:12001: result: -fPIC -DPIC
configure:12009: checking if g++ PIC flag -fPIC -DPIC works
configure:12027: g++ -c -std=c++11 -O3 -Wall -W -Werror -fPIC -DPIC -DPIC conftest.cpp >&5
configure:12031: $? = 0
configure:12044: result: yes
configure:12067: checking if g++ static flag -static works
configure:12095: result: yes
configure:12107: checking if g++ supports -c -o file.o
configure:12128: g++ -c -std=c++11 -O3 -Wall -W -Werror -o out/conftest2.o conftest.cpp >&5
configure:12132: $? = 0
configure:12154: result: yes
configure:12159: checking if g++ supports -c -o file.o
configure:12206: result: yes
configure:12236: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:12276: result: yes
configure:12417: checking dynamic linker characteristics
configure:13162: result: GNU/Linux ld.so
configure:13227: checking how to hardcode library paths into programs
configure:13252: result: immediate
configure:12239: checking if libtool supports shared libraries
configure:12241: result: yes
configure:12244: checking whether to build shared libraries
configure:12268: result: yes
configure:12271: checking whether to build static libraries
configure:12275: result: no
configure:12627: checking for g77 option to produce PIC
configure:12634: result: -fPIC
configure:12642: checking if g77 PIC flag -fPIC works
configure:12660: g77 -c -g -O2 -fPIC conftest.f >&5
configure:12664: $? = 0
configure:12677: result: yes
configure:12700: checking if g77 static flag -static works
configure:12728: result: yes
configure:12740: checking if g77 supports -c -o file.o
configure:12761: g77 -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:12765: $? = 0
configure:12787: result: yes
configure:12792: checking if g77 supports -c -o file.o
configure:12839: result: yes
configure:12869: checking whether the g77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries
configure:14078: result: yes
configure:14219: checking dynamic linker characteristics
configure:14958: result: GNU/Linux ld.so
configure:15023: checking how to hardcode library paths into programs
configure:15048: result: immediate
configure:12930: checking that generated files are newer than configure
configure:12936: result: done
configure:12963: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by npstat config.status 5.6.0, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on dawn
config.status:1139: creating Makefile
config.status:1139: creating npstat/nm/Makefile
config.status:1139: creating npstat/rng/Makefile
config.status:1139: creating npstat/stat/Makefile
config.status:1139: creating npstat/wrap/Makefile
config.status:1139: creating npstat/interfaces/Makefile
config.status:1139: creating npstat/emsunfold/Makefile
config.status:1139: creating npstat/Makefile
config.status:1139: creating examples/C++/Makefile
config.status:1139: creating npstat/swig/Makefile
config.status:1139: creating npstat.pc
config.status:1311: executing depfiles commands
config.status:1388: cd npstat/nm && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles
make: Nothing to be done for 'am--depfiles'.
config.status:1393: $? = 0
config.status:1388: cd npstat/rng && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles
make: Nothing to be done for 'am--depfiles'.
config.status:1393: $? = 0
config.status:1388: cd npstat/stat && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles
make: Nothing to be done for 'am--depfiles'.
config.status:1393: $? = 0
config.status:1388: cd examples/C++ && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles
make: Nothing to be done for 'am--depfiles'.
config.status:1393: $? = 0
config.status:1388: cd npstat/swig && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles
/bin/bash: /usr/local/anaconda3/lib/libtinfo.so.6: no version information available (required by /bin/bash)
/bin/bash: /usr/local/anaconda3/lib/libtinfo.so.6: no version information available (required by /bin/bash)
/bin/bash: /usr/local/anaconda3/lib/libtinfo.so.6: no version information available (required by /bin/bash)
/bin/bash: /usr/local/anaconda3/lib/libtinfo.so.6: no version information available (required by /bin/bash)
/bin/bash: /usr/local/anaconda3/lib/libtinfo.so.6: no version information available (required by /bin/bash)
config.status:1393: $? = 0
config.status:1311: executing libtool commands
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-std=c++11 -O3 -Wall -W -Werror'
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_DEPS_CFLAGS_set=
ac_cv_env_DEPS_CFLAGS_value=
ac_cv_env_DEPS_LIBS_set=
ac_cv_env_DEPS_LIBS_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LT_SYS_LIBRARY_PATH_set=
ac_cv_env_LT_SYS_LIBRARY_PATH_value=
ac_cv_env_PKG_CONFIG_LIBDIR_set=
ac_cv_env_PKG_CONFIG_LIBDIR_value=
ac_cv_env_PKG_CONFIG_PATH_set=set
ac_cv_env_PKG_CONFIG_PATH_value=/usr/local/lib/pkgconfig
ac_cv_env_PKG_CONFIG_set=
ac_cv_env_PKG_CONFIG_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath'
ac_cv_header_dlfcn_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=x86_64-pc-linux-gnu
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_FGREP='/bin/grep -F'
ac_cv_path_GREP=/bin/grep
ac_cv_path_SED=/bin/sed
ac_cv_path_ac_pt_PKG_CONFIG=/usr/bin/pkg-config
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_lt_DD=/bin/dd
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_F77=g77
ac_cv_prog_ac_ct_MANIFEST_TOOL=mt
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_f77_v=-v
ac_cv_prog_make_make_set=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_make_support_nested_variables=yes
am_cv_prog_cc_c_o=yes
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
lt_cv_prog_compiler_pic_F77=-fPIC
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_compiler_static_works_F77=yes
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_shlibpath_overrides_runpath=yes
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_global_symbol_to_import=
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop
lt_cv_truncate_bin='/bin/dd bs=4096 count=1'
pkg_cv_DEPS_CFLAGS=-I/usr/local/include
pkg_cv_DEPS_LIBS='-L/usr/local/lib -lfftw3 -lgeners -lkstest'
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /home/igv/Hepforge/npstat/trunk/missing aclocal-1.16'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR='ar'
AUTOCONF='${SHELL} /home/igv/Hepforge/npstat/trunk/missing autoconf'
AUTOHEADER='${SHELL} /home/igv/Hepforge/npstat/trunk/missing autoheader'
AUTOMAKE='${SHELL} /home/igv/Hepforge/npstat/trunk/missing automake-1.16'
AWK='gawk'
CC='gcc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2'
CPP='gcc -E'
CPPFLAGS=''
CXX='g++'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-std=c++11 -O3 -Wall -W -Werror'
CYGPATH_W='echo'
DEFS='-DPACKAGE_NAME=\"npstat\" -DPACKAGE_TARNAME=\"npstat\" -DPACKAGE_VERSION=\"5.6.0\" -DPACKAGE_STRING=\"npstat\ 5.6.0\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"npstat\" -DVERSION=\"5.6.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\"'
DEPDIR='.deps'
DEPS_CFLAGS='-I/usr/local/include'
DEPS_LIBS='-L/usr/local/lib -lfftw3 -lgeners -lkstest'
DLLTOOL='false'
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
F77='g77'
FFLAGS='-g -O2'
FGREP='/bin/grep -F'
FLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath'
GREP='/bin/grep'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/bin/ld -m elf_x86_64'
LDFLAGS=''
LIBOBJS=''
LIBS=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
LT_SYS_LIBRARY_PATH=''
MAKEINFO='${SHELL} /home/igv/Hepforge/npstat/trunk/missing makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/bin/mkdir -p'
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJEXT='o'
OTOOL64=''
OTOOL=''
PACKAGE='npstat'
PACKAGE_BUGREPORT=''
PACKAGE_NAME='npstat'
PACKAGE_STRING='npstat 5.6.0'
PACKAGE_TARNAME='npstat'
PACKAGE_URL=''
PACKAGE_VERSION='5.6.0'
PATH_SEPARATOR=':'
PKG_CONFIG='/usr/bin/pkg-config'
PKG_CONFIG_LIBDIR=''
PKG_CONFIG_PATH='/usr/local/lib/pkgconfig'
RANLIB='ranlib'
SED='/bin/sed'
SET_MAKE=''
SHELL='/bin/bash'
STRIP='strip'
VERSION='5.6.0'
ac_ct_AR='ar'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
ac_ct_F77='g77'
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE='#'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-pc-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
host='x86_64-pc-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/igv/Hepforge/npstat/trunk/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
runstatedir='${localstatedir}/run'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "npstat"
#define PACKAGE_TARNAME "npstat"
#define PACKAGE_VERSION "5.6.0"
#define PACKAGE_STRING "npstat 5.6.0"
#define PACKAGE_BUGREPORT ""
#define PACKAGE_URL ""
#define PACKAGE "npstat"
#define VERSION "5.6.0"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
configure: exit 0

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